Coming to terms with chromatin structure (Q38557052)

4 September 2017

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title

Coming to terms with chromatin structure (English)

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4 September 2017

Liron Even-Faitelson

1

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4 September 2017

Vahideh Hassan-Zadeh

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2

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4 September 2017

Zahra Baghestani

series ordinal

3

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4 September 2017

David P Bazett-Jones

series ordinal

4

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4 September 2017

30 July 2015

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4 September 2017

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4 September 2017

125

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4 September 2017

1

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4 September 2017

95-110

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https://scigraph.springernature.com/pub.10.1007/s00412-015-0534-9

4 September 2017

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cites work

Deconvolving the recognition of DNA shape from sequence

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https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

Global chromatin architecture reflects pluripotency and lineage commitment in the early mouse embryo

21 January 2018

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https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

Chromatin position effects assayed by thousands of reporters integrated in parallel.

21 January 2018

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https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

Electron spectroscopic imaging of chromatin

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

Elucidating chromatin and nuclear domain architecture with electron spectroscopic imaging

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

A view through a chromatin loop: insights into the ecdysone activation of early genes in Drosophila

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

Revisiting higher-order and large-scale chromatin organization

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

The spatial organization of the human genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

Genome architecture: domain organization of interphase chromosomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

Three-dimensional maps of all chromosomes in human male fibroblast nuclei and prometaphase rosettes

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

High-resolution mapping and characterization of open chromatin across the genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

The spatial organization of human chromosomes within the nuclei of normal and emerin-mutant cells.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

Chromobility: the rapid movement of chromosomes in interphase nuclei.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

The non-random repositioning of whole chromosomes and individual gene loci in interphase nuclei and its relevance in disease, infection, aging, and cancer

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

Tetrahymena histone acetyltransferase A: a homolog to yeast Gcn5p linking histone acetylation to gene activation

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

A complex chromatin landscape revealed by patterns of nuclease sensitivity and histone modification within the mouse beta-globin locus

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

Long-range chromatin regulatory interactions in vivo

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

Diffusible factors are responsible for differences in nuclease sensitivity among chromatins originating from different cell types

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

Chromatin decondensation and nuclear reorganization of the HoxB locus upon induction of transcription

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

Nuclear re-organisation of the Hoxb complex during mouse embryonic development.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

Independence of repressive histone marks and chromatin compaction during senescent heterochromatic layer formation

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

Identifying gene locus associations with promyelocytic leukemia nuclear bodies using immuno-TRAP.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

Moving chromatin within the interphase nucleus-controlled transitions?

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

Long-range directional movement of an interphase chromosome site

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

Chromatin-driven behavior of topologically associating domains

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

The biology of chromatin remodeling complexes

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

The yin and yang of chromatin spatial organization

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

Non-random radial higher-order chromatin arrangements in nuclei of diploid human cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

21 January 2018

Chromosome territories

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

Differences in the localization and morphology of chromosomes in the human nucleus.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

A decade of 3C technologies: insights into nuclear organization

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

Two ways to fold the genome during the cell cycle: insights obtained with chromosome conformation capture

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

Exploring the three-dimensional organization of genomes: interpreting chromatin interaction data

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

Capturing chromosome conformation

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

Correlative light and electron spectroscopic imaging of chromatin in situ.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

Differential large-scale chromatin compaction and intranuclear positioning of transcribed versus non-transcribed transgene arrays containing beta-globin regulatory sequences.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

Topologically associating domains and their long-range contacts are established during early G1 coincident with the establishment of the replication-timing program

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

Topological domains in mammalian genomes identified by analysis of chromatin interactions

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

Chromosome organization in the nucleus - charting new territory across the Hi-Cs

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

Actin-dependent intranuclear repositioning of an active gene locus in vivo.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

Mammalian satellite DNA: a speaking dumb.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

Discovery and characterization of chromatin states for systematic annotation of the human genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

Histone acetylation and the maintenance of chromatin compaction by Polycomb repressive complexes

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

Ring1B compacts chromatin structure and represses gene expression independent of histone ubiquitination

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

Nuclear labelling after prolonged 3H-uridine incorporation as visualized by high resolution autoradiography

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

H1 linker histones are essential for mouse development and affect nucleosome spacing in vivo

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

Systematic protein location mapping reveals five principal chromatin types in Drosophila cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

Living without 30nm chromatin fibers

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

Constitutive heterochromatin reorganization during somatic cell reprogramming

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

Open and closed domains in the mouse genome are configured as 10-nm chromatin fibres

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

Efficient cell migration requires global chromatin condensation

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

Distinctive higher-order chromatin structure at mammalian centromeres

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

Chromatin architecture of the human genome: gene-rich domains are enriched in open chromatin fibers

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

DNA methylation affects nuclear organization, histone modifications, and linker histone binding but not chromatin compaction

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

Domain organization of human chromosomes revealed by mapping of nuclear lamina interactions

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

Suv4-20h2 mediates chromatin compaction and is important for cohesin recruitment to heterochromatin.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

Pericentric and centromeric transcription: a perfect balance required

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

Histones H2A/H2B inhibit the interaction of transcription factor IIIA with the Xenopus borealis somatic 5S RNA gene in a nucleosome

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

Genome-wide profiling of salt fractions maps physical properties of chromatin

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

Throwing transcription for a loop: expression of the genome in the 3D nucleus

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

Large-scale chromatin structure of inducible genes: transcription on a condensed, linear template.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

Transcription on nucleosomal templates by RNA polymerase II in vitro: inhibition of elongation with enhancement of sequence-specific pausing.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

Genome architectures revealed by tethered chromosome conformation capture and population-based modeling

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

DAPI: a DNA-specific fluorescent probe

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

Detection of chromosomes tagged with green fluorescent protein in live Arabidopsis thaliana plants

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

Comprehensive analysis of the chromatin landscape in Drosophila melanogaster

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

SWI/SNF-dependent long-range remodeling of yeast HIS3 chromatin

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

In vivo immunogold labeling confirms large-scale chromatin folding motifs.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

Chromatin Structure: A Repeating Unit of Histones and DNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

Mitotic chromosome condensation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

Chromatin modifications and their function

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

Global regulation of promoter melting in naive lymphocytes

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

CTCF binding at the H19 imprinting control region mediates maternally inherited higher-order chromatin conformation to restrict enhancer access to Igf2

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

The many faces of histone lysine methylation

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

Spectral studies on 33258 Hoechst and related bisbenzimidazole dyes useful for fluorescent detection of deoxyribonucleic acid synthesis

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

Joint annotation of chromatin state and chromatin conformation reveals relationships among domain types and identifies domains of cell-type-specific expression

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

Comprehensive mapping of long-range interactions reveals folding principles of the human genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

The Drosophila melanogaster Cajal body

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

Quantitative analysis of chromatin compaction in living cells using FLIM-FRET.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

Chromatin structure: does the 30-nm fibre exist in vivo?

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

Chromatin as dynamic 10-nm fibers

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

Use of two-color fluorescence-tagged transgenes to study interphase chromosomes in living plants.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

Hyperdynamic plasticity of chromatin proteins in pluripotent embryonic stem cells.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

Map of open and closed chromatin domains in Drosophila genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

Nuclear reorganisation and chromatin decondensation are conserved, but distinct, mechanisms linked to Hox gene activation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

Large-scale chromatin decondensation and recondensation regulated by transcription from a natural promoter

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

Genome organization in and around the nucleolus

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

The Cajal body and histone locus body

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

Segmental folding of chromosomes: a basis for structural and regulatory chromosomal neighborhoods?

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

Spatial partitioning of the regulatory landscape of the X-inactivation centre

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

Spheroid chromatin units (v bodies).

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

Nucleolus: Structure and Function

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

Active genes dynamically colocalize to shared sites of ongoing transcription

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

Tandem repetitive transgenes and fluorescent chromatin tags alter local interphase chromosome arrangement in Arabidopsis thaliana.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

Topologically associating domains are stable units of replication-timing regulation

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

Heterochromatin establishment in the context of genome-wide epigenetic reprogramming

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

A 3D map of the human genome at kilobase resolution reveals principles of chromatin looping

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

A view of the chromatin landscape

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

In vivo localization of DNA sequences and visualization of large-scale chromatin organization using lac operator/repressor recognition

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

The biogenesis of chromosome translocations.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

A random-walk/giant-loop model for interphase chromosomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

Constitutive heterochromatin formation and transcription in mammals

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

Chromatin globules: a common motif of higher order chromosome structure?

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

The role of chromosome domains in shaping the functional genome.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

Folding and organization of a contiguous chromosome region according to the gene distribution pattern in primary genomic sequence

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

Nuclear organization of active and inactive chromatin domains uncovered by chromosome conformation capture-on-chip (4C).

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

Absence of a simple code: how transcription factors read the genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

Interactions of U2 gene loci and their nuclear transcripts with Cajal (coiled) bodies: evidence for PreU2 within Cajal bodies

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

Open chromatin defined by DNaseI and FAIRE identifies regulatory elements that shape cell-type identity

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

H4K16 acetylation marks active genes and enhancers of embryonic stem cells, but does not alter chromatin compaction

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

Looping and interaction between hypersensitive sites in the active beta-globin locus

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

Large-scale chromatin unfolding and remodeling induced by VP16 acidic activation domain

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

Estimating genomic distance from DNA sequence location in cell nuclei by a random walk model

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

In vivo HP1 targeting causes large-scale chromatin condensation and enhanced histone lysine methylation

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

Modulation of Higher Order Chromatin Conformation in Mammalian Cell Nuclei Can Be Mediated by Polyamines and Divalent Cations

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

Chromosomal subunits in active genes have an altered conformation

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

Spatial genome organization: contrasting views from chromosome conformation capture and fluorescence in situ hybridization

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

Chromatin fibers observed in situ in frozen hydrated sections. Native fiber diameter is not correlated with nucleosome repeat length

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

A chromatin folding model that incorporates linker variability generates fibers resembling the native structures

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

Structural repeating units in chromatin. I. Evidence for their general occurrence

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

Probabilistic modeling of Hi-C contact maps eliminates systematic biases to characterize global chromosomal architecture.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

Evidence for the organization of chromatin in megabase pair-sized loops arranged along a random walk path in the human G0/G1 interphase nucleus

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

Genome-wide identification of regulatory DNA elements and protein-binding footprints using signatures of open chromatin in Arabidopsis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

Transcription-linked acetylation by Gcn5p of histones H3 and H4 at specific lysines

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00412-015-0534-9

Nucleosomes inhibit both transcriptional initiation and elongation by RNA polymerase III in vitro

21 January 2018

1 reference

12 December 2020

The functional architecture of the nucleus as analysed by ultrastructural cytochemistry

1 reference

12 December 2020

Localisation of rapidly and slowly labelled nuclear RNA as visualized by high resolution autoradiography

1 reference

12 December 2020

Selective unfolding of erythroid chromatin in the region of the active beta-globin gene

1 reference

12 December 2020

Chemical studies of histone acetylation. The distribution of epsilon-N-acetyllysine in calf thymus histones

1 reference

12 December 2020

Direct evidence for interphase chromosome movement during the mid-blastula transition in Drosophila

1 reference

12 December 2020

Comparison of the folding of beta-globin and ovalbumin gene containing chromatin isolated from chicken oviduct and erythrocytes

1 reference

12 December 2020

Three-dimensional folding and functional organization principles of the Drosophila genome

1 reference

12 December 2020

10.1007/S00412-015-0534-9

Identifiers

DOI

1 reference

4 September 2017

1 reference