PALI-a database of Phylogeny and ALIgnment of homologous protein structures (Q38661671)

5 September 2017

PALI-a database of Phylogeny and ALIgnment of homologous protein structures (English)

1 reference

5 September 2017

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1 reference

S Balaji

1

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5 September 2017

S Sujatha

series ordinal

2

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5 September 2017

S S Kumar

series ordinal

3

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5 September 2017

N Srinivasan

series ordinal

4

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5 September 2017

language of work or name

English

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publication date

1 January 2001

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5 September 2017

Nucleic Acids Research

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5 September 2017

29

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5 September 2017

1

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5 September 2017

61-65

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Protein structure prediction in the postgenomic era.

5 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=29825

SCOP: a structural classification of proteins database

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=29825

HOMSTRAD: a database of protein structure alignments for homologous families

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=29825

Large-scale protein structure modeling of the Saccharomyces cerevisiae genome

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=29825

A unified statistical framework for sequence comparison and structure comparison

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=29825

CATH--a hierarchic classification of protein domain structures

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=29825

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=29825

Advances in comparative protein-structure modelling

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=29825

LPFC: an Internet library of protein family core structures

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=29825

An evaluation of the performance of an automated procedure for comparative modelling of protein tertiary structure

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=29825

Knowledge-Based Protein Modeling

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=29825

Derivation of rules for comparative protein modeling from a database of protein structure alignments

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=29825

SCOP: a structural classification of proteins database for the investigation of sequences and structures

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=29825

RASMOL: biomolecular graphics for all

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=29825

How different amino acid sequences determine similar protein structures: the structure and evolutionary dynamics of the globins

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=29825

The relation between the divergence of sequence and structure in proteins

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=29825

Definition of general topological equivalence in protein structures. A procedure involving comparison of properties and relationships through simulated annealing and dynamic programming

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=29825

Database of homology-derived protein structures and the structural meaning of sequence alignment

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=29825

Multiple protein sequence alignment from tertiary structure comparison: assignment of global and residue confidence levels

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=29825

The FSSP database of structurally aligned protein fold families

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=29825

Exploring structural homology of proteins

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=29825

Phylogenetic relationships from three-dimensional protein structures

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=29825

A variable gap penalty function and feature weights for protein 3-D structure comparisons

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=29825

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=29825

Tertiary structural constraints on protein evolutionary diversity: templates, key residues and structure prediction

31 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=29825

100,000 protein structures for the biologist

1 October 2018

1 reference

12 December 2020

Molecular anatomy: phyletic relationships derived from three-dimensional structures of proteins

1 reference

12 December 2020

Detecting structural similarities: a user's guide

1 reference

12 December 2020

A databank (3D-ali) collecting related protein sequences and structures

1 reference

12 December 2020

Identifiers

DOI

10.1093/NAR/29.1.61

1 reference

5 September 2017

journals/nar/BalajiSKS01

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

5 September 2017

1 reference