Ancient vertebrate conserved noncoding elements have been evolving rapidly in teleost fishes (Q38698645)

5 September 2017

Ancient vertebrate conserved noncoding elements have been evolving rapidly in teleost fishes (English)

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5 September 2017

5

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5 September 2017

Alison P Lee

1

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Sydney Brenner

series ordinal

4

object named as

Sydney Brenner

1 reference

5 September 2017

Sze Yen Kerk

2

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PubMed ID

21081479

5 September 2017

Yue Ying Tan

series ordinal

3

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5 September 2017

15 November 2010

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Molecular Biology and Evolution

5 September 2017

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5 September 2017

28

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5 September 2017

1205-1215

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5 September 2017

3

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Transcriptional features of genomic regulatory blocks

5 September 2017

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSQ304

Divergence of Hoxc8 early enhancer parallels diverged axial morphologies between mammals and fishes

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSQ304

Paleontological evidence to date the tree of life

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSQ304

Comparative architectures of mammalian and chicken genomes reveal highly variable rates of genomic rearrangements across different lineages

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSQ304

Gene loss and evolutionary rates following whole-genome duplication in teleost fishes

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSQ304

Bichir HoxA cluster sequence reveals surprising trends in ray-finned fish genomic evolution.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSQ304

Fugu genome analysis provides evidence for a whole-genome duplication early during the evolution of ray-finned fishes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSQ304

The "fish-specific" Hox cluster duplication is coincident with the origin of teleosts.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSQ304

A transgenic Lef1/beta-catenin-dependent reporter is expressed in spatially restricted domains throughout zebrafish development.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSQ304

Evolutionary stasis: the stable chromosomes of birds

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSQ304

Adaptation or biased gene conversion? Extending the null hypothesis of molecular evolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSQ304

Homotypic clusters of transcription factor binding sites are a key component of human promoters and enhancers

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSQ304

The amphioxus genome illuminates vertebrate origins and cephalochordate biology

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSQ304

Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSQ304

Genome duplication in the teleost fish Tetraodon nigroviridis reveals the early vertebrate proto-karyotype

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSQ304

Adaptive evolution of conserved noncoding elements in mammals

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSQ304

Homotypic regulatory clusters in Drosophila.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSQ304

Evidence for stabilizing selection in a eukaryotic enhancer element.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSQ304

The evolutionary fate and consequences of duplicate genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSQ304

Early evolution of conserved regulatory sequences associated with development in vertebrates

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSQ304

From 2R to 3R: evidence for a fish-specific genome duplication (FSGD).

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSQ304

Genome of the marsupial Monodelphis domestica reveals innovation in non-coding sequences

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSQ304

DIALIGN 2: improvement of the segment-to-segment approach to multiple sequence alignment

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSQ304

Systematic human/zebrafish comparative identification of cis-regulatory activity around vertebrate developmental transcription factor genes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSQ304

Regulatory divergence of the duplicated chromosomal loci sox11a/b by subpartitioning and sequence evolution of enhancers in zebrafish.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSQ304

The evolutionary consequences of polyploidy

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSQ304

In vivo enhancer analysis of human conserved non-coding sequences

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSQ304

Forces shaping the fastest evolving regions in the human genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSQ304

Subfunction partitioning, the teleost radiation and the annotation of the human genome.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSQ304

The amphioxus genome and the evolution of the chordate karyotype

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSQ304

Detecting positive selection within genomes: the problem of biased gene conversion

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSQ304

Elephant shark (Callorhinchus milii) provides insights into the evolution of Hox gene clusters in gnathostomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSQ304

The importance of being cis: evolution of orthologous fish and mammalian enhancer activity.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSQ304

Arrays of ultraconserved non-coding regions span the loci of key developmental genes in vertebrate genomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSQ304

Scales of thelodont and shark-like fishes from the Ordovician of Colorado

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSQ304

Did genome duplication drive the origin of teleosts? A comparative study of diversification in ray-finned fishes

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSQ304

Evolutionary conservation of regulatory elements in vertebrate Hox gene clusters

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSQ304

Precise arrangement of factor-binding sites is required for murine CD4 promoter function

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSQ304

Five-vertebrate ChIP-seq reveals the evolutionary dynamics of transcription factor binding

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSQ304

Consequences of genome duplication

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSQ304

Human-zebrafish non-coding conserved elements act in vivo to regulate transcription

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSQ304

Many genes in fish have species-specific asymmetric rates of molecular evolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSQ304

Large-Scale Appearance of Ultraconserved Elements in Tetrapod Genomes and Slowdown of the Molecular Clock

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSQ304

MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) Software Version 4.0

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSQ304

Applications for protein sequence-function evolution data: mRNA/protein expression analysis and coding SNP scoring tools

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSQ304

Evolution of cis elements in the differential expression of two Hoxa2 coparalogous genes in pufferfish (Takifugu rubripes).

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSQ304

Major events in the genome evolution of vertebrates: paranome age and size differ considerably between ray-finned fishes and land vertebrates

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSQ304

Ancient noncoding elements conserved in the human genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSQ304

Survey sequencing and comparative analysis of the elephant shark (Callorhinchus milii) genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSQ304

EnsemblCompara GeneTrees: Complete, duplication-aware phylogenetic trees in vertebrates

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSQ304

VISTA Enhancer Browser--a database of tissue-specific human enhancers

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSQ304

Divergence of Conserved Non-Coding Sequences: Rate Estimates and Relative Rate Tests

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSQ304

Large number of ultraconserved elements were already present in the jawed vertebrate ancestor

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSQ304

Comparative genomics using Fugu reveals insights into regulatory subfunctionalization

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSQ304

Highly conserved non-coding sequences are associated with vertebrate development

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSQ304

Phylogenetic timing of the fish-specific genome duplication correlates with the diversification of teleost fish

21 January 2018

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1093/MOLBEV/MSQ304

Identifiers

DOI

10.1093/MOLBEV/MSQ304

1 reference

5 September 2017

1 reference

PubMed ID

21081479