Uncovering the trimethylamine-producing bacteria of the human gut microbiota (Q38785297)

6 September 2017

Uncovering the trimethylamine-producing bacteria of the human gut microbiota (English)

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6 September 2017

4

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28506279%20AND%20SRC:MED&resulttype=core&format=json

10 June 2020

author name string

Silke Rath

series ordinal

1

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10 June 2020

Benjamin Heidrich

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2

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10 June 2020

Dietmar H Pieper

series ordinal

3

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10 June 2020

publication date

15 May 2017

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6 September 2017

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10 June 2020

volume

5

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10 June 2020

page(s)

54

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10 June 2020

issue

1

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https://scigraph.springernature.com/pub.10.1186/s40168-017-0271-9

10 June 2020

exact match

0 references

cites work

Microbiology Meets Big Data: The Case of Gut Microbiota-Derived Trimethylamine

1 reference

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Xander: employing a novel method for efficient gene-targeted metagenomic assembly

6 September 2017

1 reference

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Serum Trimethylamine-N-Oxide is Elevated in CKD and Correlates with Coronary Atherosclerosis Burden

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5433236

16S rRNA gene-based profiling of the human infant gut microbiota is strongly influenced by sample processing and PCR primer choice

6 September 2017

1 reference

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Characterization and detection of a widely distributed gene cluster that predicts anaerobic choline utilization by human gut bacteria

6 September 2017

1 reference

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Intestinal microbiota composition modulates choline bioavailability from diet and accumulation of the proatherogenic metabolite trimethylamine-N-oxide

6 September 2017

1 reference

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γ-Butyrobetaine is a proatherogenic intermediate in gut microbial metabolism of L-carnitine to TMAO

6 September 2017

1 reference

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Microbiota-dependent metabolite trimethylamine-N-oxide is associated with disease severity and survival of patients with chronic heart failure

6 September 2017

1 reference

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Diet is a major factor governing the fecal butyrate-producing community structure across Mammalia, Aves and Reptilia

6 September 2017

1 reference

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Demonstrating microbial co-occurrence pattern analyses within and between ecosystems

6 September 2017

1 reference

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Revealing the bacterial butyrate synthesis pathways by analyzing (meta)genomic data

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5433236

Carnitine metabolism to trimethylamine by an unusual Rieske-type oxygenase from human microbiota

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5433236

Ribosomal Database Project: data and tools for high throughput rRNA analysis

6 September 2017

1 reference

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Ecological patterns of nifH genes in four terrestrial climatic zones explored with targeted metagenomics using FrameBot, a new informatics tool

6 September 2017

1 reference

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phyloseq: an R package for reproducible interactive analysis and graphics of microbiome census data

6 September 2017

1 reference

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Intestinal microbial metabolism of phosphatidylcholine and cardiovascular risk

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5433236

Intestinal microbiota metabolism of L-carnitine, a nutrient in red meat, promotes atherosclerosis

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5433236

Symptomatic atherosclerosis is associated with an altered gut metagenome

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5433236

Microbial conversion of choline to trimethylamine requires a glycyl radical enzyme

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5433236

Complex carbohydrate utilization by the healthy human microbiome

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5433236

A framework for human microbiome research

6 September 2017

1 reference

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dbCAN: a web resource for automated carbohydrate-active enzyme annotation

6 September 2017

1 reference

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IMG: the Integrated Microbial Genomes database and comparative analysis system

6 September 2017

1 reference

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Enterotypes of the human gut microbiome

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5433236

Gut flora metabolism of phosphatidylcholine promotes cardiovascular disease

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5433236

Trimethylaminuria: an under-recognised and socially debilitating metabolic disorder.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5433236

FastTree 2--approximately maximum-likelihood trees for large alignments

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5433236

Naive Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5433236

Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16S rRNA

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5433236

Microbial Community Analysis with Ribosomal Gene Fragments from Shotgun Metagenomes

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5433236

Analysis Tool Web Services from the EMBL-EBI.

14 September 2017

1 reference

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10.1186/S40168-017-0271-9

23 June 2018

Identifiers

DOI

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10 June 2020

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28506279%20AND%20SRC:MED&resulttype=core&format=json

10 June 2020

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