Nucleosome mobility and the regulation of gene expression: Insights from single-molecule studies. (Q38885861)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28329910%20AND%20SRC:MED&resulttype=core&format=json

13 March 2020

title

Nucleosome mobility and the regulation of gene expression: Insights from single-molecule studies (English)

1 reference

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13 March 2020

6

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13 March 2020

Sergei Rudnizky

series ordinal

1

1 reference

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13 March 2020

2

Omri Malik

1 reference

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13 March 2020

3

Adaiah Bavly

1 reference

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13 March 2020

4

Lilach Pnueli

1 reference

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13 March 2020

5

Philippa Melamed

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13 March 2020

publication date

2 April 2017

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13 March 2020

1 reference

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13 March 2020

volume

26

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13 March 2020

issue

7

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13 March 2020

page(s)

1266-1277

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H2A.Z controls the stability and mobility of nucleosomes to regulate expression of the LH genes

13 March 2020

cites work

1 reference

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Nucleosome dynamics: Sequence matters

10 July 2018

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Structural analysis of nucleosomal barrier to transcription

10 July 2018

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Asymmetric unwrapping of nucleosomes under tension directed by DNA local flexibility

10 July 2018

1 reference

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H2A.Z: a molecular rheostat for transcriptional control

10 July 2018

1 reference

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Millisecond dynamics of RNA polymerase II translocation at atomic resolution

10 July 2018

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Nucleosomes are context-specific, H2A.Z-modulated barriers to RNA polymerase

10 July 2018

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Histone- and DNA sequence-dependent stability of nucleosomes studied by single-pair FRET.

10 July 2018

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Determinants of nucleosome positioning

10 July 2018

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The mechanics behind DNA sequence-dependent properties of the nucleosome

10 July 2018

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Recent advances in single molecule studies of nucleosomes

10 July 2018

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Structure and Scm3-mediated assembly of budding yeast centromeric nucleosomes

10 July 2018

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Histone H2A C-terminus regulates chromatin dynamics, remodeling, and histone H1 binding

10 July 2018

1 reference

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Evidence against a genomic code for nucleosome positioning. Reply to "Nucleosome sequence preferences influence in vivo nucleosome organization.".

10 July 2018

1 reference

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Direct measurements of the nucleosome-forming preferences of periodic DNA motifs challenge established models

10 July 2018

1 reference

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Reconciling the positive and negative roles of histone H2A.Z in gene transcription

10 July 2018

1 reference

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A method for genetically installing site-specific acetylation in recombinant histones defines the effects of H3 K56 acetylation

10 July 2018

1 reference

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Nucleosome disassembly intermediates characterized by single-molecule FRET.

10 July 2018

1 reference

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10 years of tension on chromatin: results from single molecule force spectroscopy

10 July 2018

1 reference

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Nucleosomal fluctuations govern the transcription dynamics of RNA polymerase II.

10 July 2018

1 reference

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H3.3/H2A.Z double variant-containing nucleosomes mark 'nucleosome-free regions' of active promoters and other regulatory regions

10 July 2018

1 reference

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spFRET using alternating excitation and FCS reveals progressive DNA unwrapping in nucleosomes

10 July 2018

1 reference

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The origin of short transcriptional pauses

10 July 2018

1 reference

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The DNA-encoded nucleosome organization of a eukaryotic genome

10 July 2018

1 reference

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H2AZ is enriched at polycomb complex target genes in ES cells and is necessary for lineage commitment

10 July 2018

1 reference

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H2A.Z: view from the top.

10 July 2018

1 reference

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Differential detection of dual traps improves the spatial resolution of optical tweezers

10 July 2018

1 reference

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Preferential occupancy of histone variant H2AZ at inactive promoters influences local histone modifications and chromatin remodeling

10 July 2018

1 reference

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Fast, long-range, reversible conformational fluctuations in nucleosomes revealed by single-pair fluorescence resonance energy transfer

10 July 2018

1 reference

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Rapid spontaneous accessibility of nucleosomal DNA.

10 July 2018

1 reference

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Nucleosomes facilitate their own invasion

10 July 2018

1 reference

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Sin mutations alter inherent nucleosome mobility

10 July 2018

1 reference

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Nucleosome Repositioning via Loop Formation

10 July 2018

1 reference

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Role of DNA sequence in nucleosome stability and dynamics

10 July 2018

1 reference

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Crystal structure of a nucleosome core particle containing the variant histone H2A.Z

10 July 2018

1 reference

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Histone H2A.Z regulats transcription and is partially redundant with nucleosome remodeling complexes

10 July 2018

1 reference

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Twenty-five years of the nucleosome, fundamental particle of the eukaryote chromosome

10 July 2018

1 reference

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Trinucleotide models for DNA bending propensity: comparison of models based on DNaseI digestion and nucleosome packaging data.

10 July 2018

1 reference

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Linker histones H1 and H5 prevent the mobility of positioned nucleosomes

10 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5477540

Mobility of positioned nucleosomes on 5 S rDNA.

10 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5477540

Mobile nucleosomes--a general behavior

10 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5477540

High-resolution dynamic mapping of histone-DNA interactions in a nucleosome

10 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5477540

Structural variability of nucleosomes detected by single-pair Förster resonance energy transfer: histone acetylation, sequence variation, and salt effects

22 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5477540

Backtracking determines the force sensitivity of RNAP II in a factor-dependent manner

22 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5477540

Probing SWI/SNF remodeling of the nucleosome by unzipping single DNA molecules.

22 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5477540

Conserved Histone Variant H2A.Z Protects Euchromatin from the Ectopic Spread of Silent Heterochromatin

22 August 2018

2 references

Crossref

https://api.crossref.org/works/10.1002%2FPRO.3159

21 January 2018

12 December 2020

Mechanism of protein access to specific DNA sequences in chromatin: a dynamic equilibrium model for gene regulation

1 reference

12 December 2020

Positioning and stability of nucleosomes on MMTV 3'LTR sequences

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12 December 2020

Chromatin Dynamics: Nucleosomes go Mobile through Twist Defects

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12 December 2020

Characterization of the stability and folding of H2A.Z chromatin particles: implications for transcriptional activation

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12 December 2020

Nucleosomal stability and dynamics vary significantly when viewed by internal versus terminal labels

1 reference

12 December 2020

Nature of the nucleosomal barrier to RNA polymerase II

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12 December 2020

Polymer reptation and nucleosome repositioning

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12 December 2020

The essential histone variant H2A.Z regulates the equilibrium between different chromatin conformational states

1 reference

12 December 2020

Sequence and position-dependence of the equilibrium accessibility of nucleosomal DNA target sites

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12 December 2020

Sequence-dependent nucleosome structure and stability variations detected by Förster resonance energy transfer

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12 December 2020

New DNA sequence rules for high affinity binding to histone octamer and sequence-directed nucleosome positioning

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12 December 2020

Nucleosomes can form a polar barrier to transcript elongation by RNA polymerase II

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12 December 2020

Identifiers

DOI

10.1002/PRO.3159

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28329910%20AND%20SRC:MED&resulttype=core&format=json

13 March 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28329910%20AND%20SRC:MED&resulttype=core&format=json

13 March 2020

PubMed publication ID

28329910

1 reference