Native-like mean structure in the unfolded ensemble of small proteins (Q39123901)

9 September 2017

Native-like mean structure in the unfolded ensemble of small proteins (English)

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9 September 2017

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4

Michael R Shirts

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9 September 2017

5

Vijay S Pande

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9 September 2017

Bojan Zagrovic

1

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9 September 2017

Christopher D Snow

series ordinal

2

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9 September 2017

Siraj Khaliq

series ordinal

3

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9 September 2017

language of work or name

English

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publication date

1 October 2002

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Journal of Molecular Biology

9 September 2017

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9 September 2017

323

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9 September 2017

1

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9 September 2017

153-164

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Unfolded, yes, but random? Never!

9 September 2017

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https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900888-4

Comprehensive NOE characterization of a partially folded large fragment of staphylococcal nuclease Delta131Delta, using NMR methods with improved resolution.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900888-4

Characterization of residual structure in the thermally denatured state of barnase by simulation and experiment: description of the folding pathway

7 January 2021

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https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900888-4

A physical basis for protein secondary structure

7 January 2021

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https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900888-4

Staphylococcal protein A: unfolding pathways, unfolded states, and differences between the B and E domains

7 January 2021

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https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900888-4

Protein folding and unfolding in microseconds to nanoseconds by experiment and simulation

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900888-4

The Key to Solving the Protein-Folding Problem Lies in an Accurate Description of the Denatured State

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900888-4

Simulations of the structural and dynamical properties of denatured proteins: the "molten coil" state of bovine pancreatic trypsin inhibitor.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900888-4

Persistence of native-like topology in a denatured protein in 8 M urea

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900888-4

Polyproline II structure in a sequence of seven alanine residues.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900888-4

Protein folding and unfolding at atomic resolution

7 January 2021

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https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900888-4

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900888-4

Structural and dynamic characterization of an unfolded state of poplar apo-plastocyanin formed under nondenaturing conditions

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900888-4

NOE data demonstrating a compact unfolded state for an SH3 domain under non-denaturing conditions.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900888-4

Slow dynamics in folded and unfolded states of an SH3 domain

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900888-4

Identification and characterization of the unfolding transition state of chymotrypsin inhibitor 2 by molecular dynamics simulations.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900888-4

Molecular dynamics simulation of the unfolding of barnase: characterization of the major intermediate.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900888-4

Protein folding from a highly disordered denatured state: the folding pathway of chymotrypsin inhibitor 2 at atomic resolution

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900888-4

Mathematical analysis of coupled parallel simulations

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900888-4

Beta-hairpin folding simulations in atomistic detail using an implicit solvent model

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900888-4

NMR structure of the 35-residue villin headpiece subdomain

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900888-4

Tryptophan zippers: Stable, monomeric -hairpins

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900888-4

Design and NMR analyses of compact, independently folded BBA motifs

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900888-4

Pathways to a protein folding intermediate observed in a 1-microsecond simulation in aqueous solution

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900888-4

Folding simulations of a three-stranded antiparallel beta -sheet peptide

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900888-4

Characterization of long-range structure in the denatured state of staphylococcal nuclease. I. Paramagnetic relaxation enhancement by nitroxide spin labels

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900888-4

Characterization of long-range structure in the denatured state of staphylococcal nuclease. II. Distance restraints from paramagnetic relaxation and calculation of an ensemble of structures

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900888-4

The Flory isolated-pair hypothesis is not valid for polypeptide chains: implications for protein folding

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900888-4

Protein folding for realists: a timeless phenomenon

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900888-4

Assessing the effect of conformational averaging on the measured values of observables

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900888-4

Molecular dynamics simulations of a highly charged peptide from an SH3 domain: possible sequence-function relationship

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900888-4

The effect of motional averaging on the calculation of NMR-derived structural properties

7 January 2021

2 references

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900888-4

7 January 2021

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900888-4

inferred from DOI database lookup

7 January 2021

based on heuristic

Clustering of low-energy conformations near the native structures of small proteins

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900888-4

Distance geometry generates native-like folds for small helical proteins using the consensus distances of predicted protein structures

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900888-4

Ab initio fold prediction of small helical proteins using distance geometry and knowledge-based scoring functions

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900888-4

Rattle: A “velocity” version of the shake algorithm for molecular dynamics calculations

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900888-4

The OPLS [optimized potentials for liquid simulations] potential functions for proteins, energy minimizations for crystals of cyclic peptides and crambin.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900888-4

Dictionary of protein secondary structure: pattern recognition of hydrogen-bonded and geometrical features

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900888-4

10.1016/S0022-2836(02)00888-4

7 January 2021

Identifiers

DOI

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9 September 2017

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