An intronic G run within HIV-1 intron 2 is critical for splicing regulation of vif mRNA. (Q39222999)

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21 February 2020

title

An intronic G run within HIV-1 intron 2 is critical for splicing regulation of vif mRNA (English)

1 reference

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21 February 2020

6

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21 February 2020

12

Carsten Münk

1 reference

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21 February 2020

author name string

Marek Widera

1

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21 February 2020

Steffen Erkelenz

2

1 reference

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21 February 2020

Frank Hillebrand

3

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21 February 2020

Aikaterini Krikoni

4

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21 February 2020

Darius Widera

5

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21 February 2020

René Deenen

7

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21 February 2020

Michael Gombert

8

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21 February 2020

Rafael Dellen

9

1 reference

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21 February 2020

Tanya Pfeiffer

10

1 reference

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21 February 2020

Barbara Kaltschmidt

11

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21 February 2020

Valerie Bosch

13

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21 February 2020

Karl Köhrer

14

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21 February 2020

Heiner Schaal

15

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21 February 2020

language of work or name

English

0 references

publication date

19 December 2012

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21 February 2020

1 reference

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21 February 2020

volume

87

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21 February 2020

issue

5

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21 February 2020

page(s)

2707-2720

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Tra2-mediated recognition of HIV-1 5' splice site D3 as a key factor in the processing of vpr mRNA

21 February 2020

cites work

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Formation of trans-activation competent HIV-1 Rev:RRE complexes requires the recruitment of multiple protein activation domains

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SAMHD1-deficient CD14+ cells from individuals with Aicardi-Goutières syndrome are highly susceptible to HIV-1 infection

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Next-generation sequencing reveals HIV-1-mediated suppression of T cell activation and RNA processing and regulation of noncoding RNA expression in a CD4+ T cell line

10 September 2017

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10 September 2017

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SAMHD1 is the dendritic- and myeloid-cell-specific HIV-1 restriction factor counteracted by Vpx

10 September 2017

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A disease-associated polymorphism alters splicing of the human CD45 phosphatase gene by disrupting combinatorial repression by heterogeneous nuclear ribonucleoproteins (hnRNPs).

10 September 2017

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U1 snRNA directly interacts with polypyrimidine tract-binding protein during splicing repression

10 September 2017

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G Run-mediated recognition of proteolipid protein and DM20 5' splice sites by U1 small nuclear RNA is regulated by context and proximity to the splice site.

10 September 2017

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Human SAP18 mediates assembly of a splicing regulatory multiprotein complex via its ubiquitin-like fold

10 September 2017

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Excessive RNA splicing and inhibition of HIV-1 replication induced by modified U1 small nuclear RNAs

10 September 2017

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Immune evasion and counteraction of restriction factors by HIV-1 and other primate lentiviruses

10 September 2017

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HIV-1 Vif versus the APOBEC3 cytidine deaminases: an intracellular duel between pathogen and host restriction factors

10 September 2017

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Splice site strength-dependent activity and genetic buffering by poly-G runs

10 September 2017

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CEM-T4 cells do not lack an APOBEC3G cofactor

10 September 2017

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Regulation of Vif mRNA splicing by human immunodeficiency virus type 1 requires 5' splice site D2 and an exonic splicing enhancer to counteract cellular restriction factor APOBEC3G

10 September 2017

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The spliceosome: design principles of a dynamic RNP machine

10 September 2017

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Role of cellular RNA processing factors in human immunodeficiency virus type 1 mRNA metabolism, replication, and infectivity

10 September 2017

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Negative and positive mRNA splicing elements act competitively to regulate human immunodeficiency virus type 1 vif gene expression

10 September 2017

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HIV-1 infection induces changes in expression of cellular splicing factors that regulate alternative viral splicing and virus production in macrophages

10 September 2017

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APOBEC-mediated viral restriction: not simply editing?

10 September 2017

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The strength of the HIV-1 3' splice sites affects Rev function.

10 September 2017

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A suboptimal 5' splice site downstream of HIV-1 splice site A1 is required for unspliced viral mRNA accumulation and efficient virus replication

10 September 2017

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A combinatorial code for splicing silencing: UAGG and GGGG motifs

10 September 2017

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Viral RNA is required for the association of APOBEC3G with human immunodeficiency virus type 1 nucleoprotein complexes

10 September 2017

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Production of infectious human immunodeficiency virus type 1 does not require depletion of APOBEC3G from virus-producing cells

10 September 2017

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Human Immunodeficiency Virus Type 1 hnRNP A/B-Dependent Exonic Splicing Silencer ESSV Antagonizes Binding of U2AF65 to Viral Polypyrimidine Tracts

10 September 2017

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Nuclear mRNA export: insights from virology

10 September 2017

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Species-specific exclusion of APOBEC3G from HIV-1 virions by Vif

10 September 2017

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Isolation of a human gene that inhibits HIV-1 infection and is suppressed by the viral Vif protein

10 September 2017

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An anthropoid-specific locus of orphan C to U RNA-editing enzymes on chromosome 22

10 September 2017

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Determination of the RNA binding specificity of the heterogeneous nuclear ribonucleoprotein (hnRNP) H/H'/F/2H9 family

10 September 2017

1 reference

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A second exon splicing silencer within human immunodeficiency virus type 1 tat exon 2 represses splicing of Tat mRNA and binds protein hnRNP H.

10 September 2017

1 reference

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A purine-rich intronic element enhances alternative splicing of thyroid hormone receptor mRNA

10 September 2017

1 reference

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The sequence complementarity between HIV-1 5' splice site SD4 and U1 snRNA determines the steady-state level of an unstable env pre-mRNA.

10 September 2017

1 reference

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Binding of hnRNP H to an exonic splicing silencer is involved in the regulation of alternative splicing of the rat beta-tropomyosin gene

10 September 2017

1 reference

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10 September 2017

THE HIV-1 REV PROTEIN

1 reference

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hnRNP H is a component of a splicing enhancer complex that activates a c-src alternative exon in neuronal cells

10 September 2017

1 reference

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G triplets located throughout a class of small vertebrate introns enforce intron borders and regulate splice site selection

10 September 2017

1 reference

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Alternative splicing of human immunodeficiency virus type 1 mRNA modulates viral protein expression, replication, and infectivity.

10 September 2017

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Subcellular localization of the Vif protein of human immunodeficiency virus type 1.

10 September 2017

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Exon and intron sequences, respectively, repress and activate splicing of a fibroblast growth factor receptor 2 alternative exon

10 September 2017

1 reference

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Cleavage of Structural Proteins during the Assembly of the Head of Bacteriophage T4

10 September 2017

1 reference

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Simple, rapid, quantitative, syncytium-forming microassay for the detection of human immunodeficiency virus neutralizing antibody

10 September 2017

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Production of acquired immunodeficiency syndrome-associated retrovirus in human and nonhuman cells transfected with an infectious molecular clone

10 September 2017

1 reference

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Single-Step Method of RNA Isolation by Acid Guanidinium Thiocyanate–Phenol–Chloroform Extraction

10 September 2017

1 reference

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A novel human immunodeficiency virus type 1 protein, tev, shares sequences with tat, env, and rev proteins

10 September 2017

1 reference

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Exon definition may facilitate splice site selection in RNAs with multiple exons

10 September 2017

1 reference

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An intronic splicing enhancer binds U1 snRNPs to enhance splicing and select 5' splice sites

10 September 2017

1 reference

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SR proteins and hnRNP H regulate the splicing of the HIV-1 tev-specific exon 6D.

10 September 2017

1 reference

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Polypyrimidine tract binding protein controls the transition from exon definition to an intron defined spliceosome

14 September 2017

1 reference

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Cell-free infectivity of HIV type 1 produced in nonpermissive cells is only moderately impacted by C-terminal Env truncation despite abrogation of viral spread

14 September 2017

1 reference

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Complex splicing control of the human Thrombopoietin gene by intronic G runs

14 September 2017

1 reference

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A novel splice donor site in the gag-pol gene is required for HIV-1 RNA stability

14 September 2017

1 reference

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hnRNP H binding at the 5' splice site correlates with the pathological effect of two intronic mutations in the NF-1 and TSHbeta genes

14 September 2017

1 reference

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High level expression of human immunodeficiency virus type-1 Vif inhibits viral infectivity by modulating proteolytic processing of the Gag precursor at the p2/nucleocapsid processing site

14 September 2017

1 reference

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A novel approach to describe a U1 snRNA binding site.

14 September 2017

1 reference

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Human growth hormone as a reporter gene in regulation studies employing transient gene expression

14 September 2017

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Influence of the small leader exons 2 and 3 on human immunodeficiency virus type 1 gene expression

14 September 2017

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Characterization of an intron splice enhancer that regulates alternative splicing of human GH pre-mRNA.

25 September 2017

1 reference

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Differential effects of hnRNP D/AUF1 isoforms on HIV-1 gene expression.

25 September 2017

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CONTINUOUS CULTURE OF HUMAN LYMPHOBLASTS FROM PERIPHERAL BLOOD OF A CHILD WITH ACUTE LEUKEMIA.

15 June 2018

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An intron splicing enhancer containing a G-rich repeat facilitates inclusion of a vertebrate micro-exon.

15 June 2018

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The generally expressed hnRNP F is involved in a neural-specific pre-mRNA splicing event

15 June 2018

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Quantitative infectivity assay for HIV-1 and-2.

15 June 2018

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An ATP-independent complex commits pre-mRNA to the mammalian spliceosome assembly pathway

15 June 2018

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Retained in vitro infectivity and cytopathogenicity of HIV-1 despite truncation of the C-terminal tail of the env gene product

15 June 2018

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The HIV-1 major splice donor D1 is activated by splicing enhancer elements within the leader region and the p17-inhibitory sequence

15 June 2018

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Insights into the selective activation of alternatively used splice acceptors by the human immunodeficiency virus type-1 bidirectional splicing enhancer

21 August 2018

1 reference

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Computational searches for splicing signals.

21 August 2018

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Evolution of the AID/APOBEC family of polynucleotide (deoxy)cytidine deaminases.

21 August 2018

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Maximum entropy modeling of short sequence motifs with applications to RNA splicing signals.

21 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3571361

New CD4(+) cell line susceptible to infection by HIV-1.

21 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3571361

U1 snRNP targets an essential splicing factor, U2AF65, to the 3' splice site by a network of interactions spanning the exon

21 August 2018

1 reference

12 December 2020

Epitope mapping and topology of baculovirus-expressed HIV-1 gp160 determined with a panel of murine monoclonal antibodies

1 reference

12 December 2020

Heterogeneous nuclear ribonucleoprotein F/H proteins modulate the alternative splicing of the apoptotic mediator Bcl-x

1 reference

12 December 2020

Members of the heterogeneous nuclear ribonucleoprotein H family activate splicing of an HIV-1 splicing substrate by promoting formation of ATP-dependent spliceosomal complexes

1 reference

12 December 2020

Identifiers

DOI

10.1128/JVI.02755-12

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23255806%20AND%20SRC:MED&resulttype=core&format=json

release_pul56qxdenbfdicooypjck5qvm

21 February 2020

Fatcat ID

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/pul56qxdenbfdicooypjck5qvm

24 November 2022

mapped directly with Wikidata item

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23255806%20AND%20SRC:MED&resulttype=core&format=json

21 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23255806%20AND%20SRC:MED&resulttype=core&format=json