Size, motion, and function of the SecY translocon revealed by molecular dynamics simulations with virtual probes (Q39269767)

10 September 2017

Size, motion, and function of the SecY translocon revealed by molecular dynamics simulations with virtual probes (English)

1 reference

10 September 2017

Pu Tian

1

1 reference

10 September 2017

Ioan Andricioaei

series ordinal

2

1 reference

10 September 2017

language of work or name

English

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publication date

3 February 2006

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10 September 2017

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10 September 2017

90

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10 September 2017

8

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10 September 2017

2718-2730

1 reference

describes a project that uses

10 September 2017

molecular dynamics simulation

1 reference

based on heuristic

inferred from title

cites work

Structure of the E. coli protein-conducting channel bound to a translating ribosome

1 reference

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Interfacial folding and membrane insertion of designed peptides studied by molecular dynamics simulations

10 September 2017

1 reference

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The machinery of membrane protein assembly

10 September 2017

1 reference

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Structural insight into the protein translocation channel

10 September 2017

1 reference

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Mechanical processes in biochemistry

10 September 2017

1 reference

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Theory and simulation of water permeation in aquaporin-1.

10 September 2017

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X-ray structure of a protein-conducting channel

10 September 2017

1 reference

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Ten years of tension: single-molecule DNA mechanics

10 September 2017

1 reference

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Three-dimensional structure of the bacterial protein-translocation complex SecYEG

10 September 2017

1 reference

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Long time dynamics of Met-enkephalin: comparison of explicit and implicit solvent models

10 September 2017

1 reference

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The Sec protein-translocation pathway.

10 September 2017

1 reference

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Role of the cytoplasmic segments of Sec61alpha in the ribosome-binding and translocation-promoting activities of the Sec61 complex

10 September 2017

1 reference

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Entropic barriers, transition states, funnels, and exponential protein folding kinetics: a simple model

10 September 2017

1 reference

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The dimensions of the protein import channels in the outer and inner mitochondrial membranes

10 September 2017

1 reference

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Effective energy function for proteins in solution

10 September 2017

1 reference

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Unfolding of titin immunoglobulin domains by steered molecular dynamics simulation

10 September 2017

1 reference

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Investigating the SecY plug movement at the SecYEG translocation channel.

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1414555

Mapping an interface of SecY (PrlA) and SecE (PrlG) by using synthetic phenotypes and in vivo cross-linking

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1414555

Recognition of transmembrane helices by the endoplasmic reticulum translocon.

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1414555

Binding, activation and dissociation of the dimeric SecA ATPase at the dimeric SecYEG translocase

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1414555

Evolutionarily conserved binding of ribosomes to the translocation channel via the large ribosomal RNA.

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1414555

Signal sequence recognition in posttranslational protein transport across the yeast ER membrane.

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1414555

Alignment of conduits for the nascent polypeptide chain in the ribosome-Sec61 complex

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1414555

Sequential triage of transmembrane segments by Sec61alpha during biogenesis of a native multispanning membrane protein

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1414555

The contribution of C alpha-H...O hydrogen bonds to membrane protein stability depends on the position of the amide

21 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1414555

Implicit solvent simulations of peptide interactions with anionic lipid membranes

21 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1414555

The bacterial protein-translocation complex: SecYEG dimers associate with one or two SecA molecules

21 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1414555

Effective energy function for proteins in lipid membranes

21 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1414555

Fluorescence resonance energy transfer analysis of protein translocase. SecYE from Thermus thermophilus HB8 forms a constitutive oligomer in membranes.

21 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1414555

Architecture of the protein-conducting channel associated with the translating 80S ribosome.

21 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1414555

Energetics of ion conduction through the K+ channel.

21 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1414555

Protein translocation: tunnel vision

21 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1414555

The Sec61p complex mediates the integration of a membrane protein by allowing lipid partitioning of the transmembrane domain

21 August 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/16461399

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1529/BIOPHYSJ.105.073304

1 reference

10 September 2017

1 reference

10 September 2017

1 reference