Unraveling cell type-specific and reprogrammable human replication origin signatures associated with G-quadruplex consensus motifs. (Q39321886)

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6 February 2020

title

Unraveling cell type-specific and reprogrammable human replication origin signatures associated with G-quadruplex consensus motifs (English)

1 reference

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6 February 2020

4

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6 February 2020

Christelle Dantec

6

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6 February 2020

Jean-Michel Marin

7

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6 February 2020

Jean-Marc Lemaitre

8

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6 February 2020

author name string

Emilie Besnard

1

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6 February 2020

Amélie Babled

2

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6 February 2020

Laure Lapasset

3

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6 February 2020

Hugues Parrinello

5

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6 February 2020

publication date

1 July 2012

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Nature Structural & Molecular Biology

6 February 2020

published in

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6 February 2020

volume

19

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6 February 2020

issue

8

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6 February 2020

page(s)

837-844

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A revisionist replicon model for higher eukaryotic genomes

6 February 2020

cites work

1 reference

Replication in context: dynamic regulation of DNA replication patterns in metazoans

21 January 2018

1 reference

Evaluating genome-scale approaches to eukaryotic DNA replication

21 January 2018

1 reference

Genome-wide studies highlight indirect links between human replication origins and gene regulation.

21 January 2018

1 reference

Genomic study of replication initiation in human chromosomes reveals the influence of transcription regulation and chromatin structure on origin selection

21 January 2018

1 reference

Bubble-chip analysis of human origin distributions demonstrates on a genomic scale significant clustering into zones and significant association with transcription

21 January 2018

1 reference

Eukaryotic DNA replication origins: many choices for appropriate answers

21 January 2018

1 reference

On the mechanism of DNA replication in mammalian chromosomes

21 January 2018

1 reference

Preferential localization of human origins of DNA replication at the 5'-ends of expressed genes and at evolutionarily conserved DNA sequences

21 January 2018

1 reference

Genomic specification and epigenetic regulation of eukaryotic DNA replication origins

21 January 2018

1 reference

Transcription initiation activity sets replication origin efficiency in mammalian cells

21 January 2018

1 reference

Genome-scale analysis of metazoan replication origins reveals their organization in specific but flexible sites defined by conserved features

21 January 2018

1 reference

Global reorganization of replication domains during embryonic stem cell differentiation

21 January 2018

1 reference

Replication timing and transcriptional control: beyond cause and effect--part II.

21 January 2018

1 reference

Mapping replication origins by quantifying relative abundance of nascent DNA strands using competitive polymerase chain reaction

21 January 2018

1 reference

Sole-Search: an integrated analysis program for peak detection and functional annotation using ChIP-seq data

21 January 2018

1 reference

High-throughput mapping of origins of replication in human cells

21 January 2018

1 reference

Replicon clusters are stable units of chromosome structure: evidence that nuclear organization contributes to the efficient activation and propagation of S phase in human cells

21 January 2018

1 reference

Replication fork velocities at adjacent replication origins are coordinately modified during DNA replication in human cells

21 January 2018

1 reference

Replication-associated strand asymmetries in mammalian genomes: toward detection of replication origins

21 January 2018

1 reference

The histone H4 Lys 20 methyltransferase PR-Set7 regulates replication origins in mammalian cells.

21 January 2018

1 reference

Replication initiation patterns in the beta-globin loci of totipotent and differentiated murine cells: evidence for multiple initiation regions

21 January 2018

1 reference

Progressive activation of DNA replication initiation in large domains of the immunoglobulin heavy chain locus during B cell development.

21 January 2018

1 reference

Mitotic remodeling of the replicon and chromosome structure.

21 January 2018

1 reference

Induced pluripotent stem cell lines derived from human somatic cells

21 January 2018

1 reference

Coordination of replication and transcription along a Drosophila chromosome.

21 January 2018

1 reference

DNA replication-timing analysis of human chromosome 22 at high resolution and different developmental states

21 January 2018

1 reference

Pan-S replication patterns and chromosomal domains defined by genome-tiling arrays of ENCODE genomic areas

21 January 2018

1 reference

Evolutionarily conserved replication timing profiles predict long-range chromatin interactions and distinguish closely related cell types

21 January 2018

1 reference

Replication timing of the human genome

21 January 2018

1 reference

Replication timing, chromosomal bands, and isochores

21 January 2018

1 reference

Representing GC variation along eukaryotic chromosomes

21 January 2018

1 reference

Prevalence of quadruplexes in the human genome

21 January 2018

1 reference

Guanine quadruplex DNA structure restricts methylation of CpG dinucleotides genome-wide.

21 January 2018

1 reference

Cluster analysis and display of genome-wide expression patterns

21 January 2018

1 reference

The Chinese hamster dihydrofolate reductase origin consists of multiple potential nascent-strand start sites

21 January 2018

1 reference

Eukaryotic DNA replication: anatomy of an origin

21 January 2018

1 reference

Selection for the G4 DNA motif at the 5' end of human genes

21 January 2018

1 reference

Sequence-independent DNA binding and replication initiation by the human origin recognition complex

21 January 2018

1 reference

DNA topology, not DNA sequence, is a critical determinant for Drosophila ORC-DNA binding

21 January 2018

1 reference

The importance of negative superhelicity in inducing the formation of G-quadruplex and i-motif structures in the c-Myc promoter: implications for drug targeting and control of gene expression

21 January 2018

1 reference

Promiscuous initiation on mammalian chromosomal DNA templates and its possible suppression by transcription

21 January 2018

1 reference

Genetic dissection of a mammalian replicator in the human beta-globin locus

21 January 2018

1 reference

Participation of the human beta-globin locus control region in initiation of DNA replication

21 January 2018

1 reference

Distal sequences, but not ori-beta/OBR-1, are essential for initiation of DNA replication in the Chinese hamster DHFR origin

21 January 2018

1 reference

Feeder-independent culture of human embryonic stem cells

21 January 2018

1 reference

The Integrated Genome Browser: free software for distribution and exploration of genome-scale datasets

21 January 2018

1 reference

Transition in specification of embryonic metazoan DNA replication origins

21 January 2018

1 reference

Genome-wide analysis predicts DNA structural motifs as nucleosome exclusion signals

31 March 2020

1 reference

HoxB domain induction silences DNA replication origins in the locus and specifies a single origin at its boundary.

31 March 2020

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22751019

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Broadening of DNA replication origin usage during metazoan cell differentiation

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22751019