Heterochromatin protein 1 gamma and IκB kinase alpha interdependence during tumour necrosis factor gene transcription elongation in activated macrophages. (Q39339392)

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English	Heterochromatin protein 1 gamma and IκB kinase alpha interdependence during tumour necrosis factor gene transcription elongation in activated macrophages.	scientific article

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2 February 2020

Heterochromatin protein 1 gamma and IκB kinase alpha interdependence during tumour necrosis factor gene transcription elongation in activated macrophages (English)

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2 February 2020

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2 February 2020

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Lylia Ouboussad

2

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2 February 2020

Pascal F Lefevre

3

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30 May 2012

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2 February 2020

Nucleic Acids Research

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2 February 2020

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2 February 2020

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2 February 2020

7676-7689

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2 February 2020

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4 October 2016

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April 2022 Public Data File from Crossref

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0 references

Histone variant H3.3 stimulates HSP70 transcription through cooperation with HP1γ

1 reference

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11 September 2017

Heterochromatin protein 1 (HP1) connects the FACT histone chaperone complex to the phosphorylated CTD of RNA polymerase II.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3439902

11 September 2017

IRF5 is required for late-phase TNF secretion by human dendritic cells

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3439902

11 September 2017

Distinct factors control histone variant H3.3 localization at specific genomic regions

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3439902

11 September 2017

Histone crosstalk between H3S10ph and H4K16ac generates a histone code that mediates transcription elongation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3439902

11 September 2017

Control of inducible gene expression by signal-dependent transcriptional elongation

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11 September 2017

Differential chromatin marking of introns and expressed exons by H3K36me3.

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11 September 2017

The LPS-induced transcriptional upregulation of the chicken lysozyme locus involves CTCF eviction and noncoding RNA transcription.

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11 September 2017

Cracking the RNA polymerase II CTD code

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11 September 2017

Shared principles in NF-kappaB signaling

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11 September 2017

Activation-dependent intrachromosomal interactions formed by the TNF gene promoter and two distal enhancers

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11 September 2017

The complex language of chromatin regulation during transcription

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11 September 2017

A site to remember: H3K36 methylation a mark for histone deacetylation

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11 September 2017

Proline isomerization of histone H3 regulates lysine methylation and gene expression

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11 September 2017

NIK is involved in nucleosomal regulation by enhancing histone H3 phosphorylation by IKKalpha

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11 September 2017

Histone H3 methylation by Set2 directs deacetylation of coding regions by Rpd3S to suppress spurious intragenic transcription

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11 September 2017

CTD-dependent dismantling of the RNA polymerase II elongation complex by the pre-mRNA 3'-end processing factor, Pcf11.

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3439902

11 September 2017

A novel domain in Set2 mediates RNA polymerase II interaction and couples histone H3 K36 methylation with transcript elongation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3439902

11 September 2017

SMRT derepression by the IkappaB kinase alpha: a prerequisite to NF-kappaB transcription and survival

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3439902

11 September 2017

Recognition of RNA polymerase II carboxy-terminal domain by 3'-RNA-processing factors

1 reference

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11 September 2017

The double bromodomain protein Brd4 binds to acetylated chromatin during interphase and mitosis

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11 September 2017

Histone H3 phosphorylation by IKK-alpha is critical for cytokine-induced gene expression

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3439902

11 September 2017

Tails of intrigue: phosphorylation of RNA polymerase II mediates histone methylation

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11 September 2017

The DNA methyltransferases associate with HP1 and the SUV39H1 histone methyltransferase

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11 September 2017

The Set2 histone methyltransferase functions through the phosphorylated carboxyl-terminal domain of RNA polymerase II.

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3439902

11 September 2017

Transcription factor complex formation and chromatin fine structure alterations at the murine c-fms (CSF-1 receptor) locus during maturation of myeloid precursor cells

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11 September 2017

The histone variant H3.3 marks active chromatin by replication-independent nucleosome assembly

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3439902

11 September 2017

Integrating mRNA processing with transcription

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3439902

11 September 2017

Methylation of histone H3 lysine 9 creates a binding site for HP1 proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3439902

11 September 2017

HP1gamma associates with euchromatin and heterochromatin in mammalian nuclei and chromosomes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3439902

11 September 2017

Identification of heterochromatin protein 1 (HP1) as a phosphorylation target by Pim-1 kinase and the effect of phosphorylation on the transcriptional repression function of HP1(1)

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3439902

11 September 2017

Phosphorylation of NF-kappa B p65 by PKA stimulates transcriptional activity by promoting a novel bivalent interaction with the coactivator CBP/p300

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3439902

11 September 2017

Transcription elongation factor P-TEFb is required for HIV-1 tat transactivation in vitro

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11 September 2017

Histone H3 lysine 9 trimethylation and HP1γ favor inclusion of alternative exons.

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14 September 2017

Role of the histone H3 lysine 4 methyltransferase, SET7/9, in the regulation of NF-kappaB-dependent inflammatory genes. Relevance to diabetes and inflammation

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14 September 2017

Histone H3 lysine 9 methylation and HP1gamma are associated with transcription elongation through mammalian chromatin

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3439902

14 September 2017

Differentiation-dependent alterations in histone methylation and chromatin architecture at the inducible chicken lysozyme gene.

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3439902

14 September 2017

A slow RNA polymerase II affects alternative splicing in vivo

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3439902

14 September 2017

Developmentally regulated recruitment of transcription factors and chromatin modification activities to chicken lysozyme cis-regulatory elements in vivo

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14 September 2017

A recurrent network involving the transcription factors PU.1 and Gfi1 orchestrates innate and adaptive immune cell fates

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3439902

15 June 2018

Rapid, transcription-independent loss of nucleosomes over a large chromatin domain at Hsp70 loci

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15 June 2018

Regulation of an inducible promoter by an HP1beta-HP1gamma switch

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15 June 2018

NF-kappaB binds P-TEFb to stimulate transcriptional elongation by RNA polymerase II.

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15 June 2018

IL-10 inhibits transcription elongation of the human TNF gene in primary macrophages

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3439902

21 August 2018

Deactivation of the kinase IKK by CUEDC2 through recruitment of the phosphatase PP1.

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21 August 2018

Analyzing histone modification using crosslinked chromatin treated with micrococcal nuclease.

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3439902

21 August 2018

Evidence for the existence of an HP1-mediated subcode within the histone code.

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3439902

21 August 2018

A nucleosomal function for IkappaB kinase-alpha in NF-kappaB-dependent gene expression

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3439902

21 August 2018

p38-Dependent marking of inflammatory genes for increased NF-kappa B recruitment

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21 August 2018

Transcriptional elongation of c-myb is regulated by NF-kappaB (p50/RelB).

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3439902

21 August 2018

Chromatin organization marks exon-intron structure

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https://api.crossref.org/works/10.1093%2FNAR%2FGKS509

21 January 2018

IKKα limits macrophage NF-κB activation and contributes to the resolution of inflammation

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21 January 2018

IKKalpha: a chromatin modifier

1 reference

https://pubmed.ncbi.nlm.nih.gov/22649058

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Promoter-dependent effect of IKKalpha on NF-kappaB/p65 DNA binding

1 reference

https://pubmed.ncbi.nlm.nih.gov/22649058

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1093/NAR/GKS509

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22649058%20AND%20SRC:MED&resulttype=core&format=json

2 February 2020

PMC publication ID

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Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22649058%20AND%20SRC:MED&resulttype=core&format=json

2 February 2020

PubMed publication ID

1 reference

Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22649058%20AND%20SRC:MED&resulttype=core&format=json

2 February 2020

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