Strain relief at the active site of phosphoserine aminotransferase induced by radiation damage (Q39367259)

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11 January 2020

title

Strain relief at the active site of phosphoserine aminotransferase induced by radiation damage (English)

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11 January 2020

1

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11 January 2020

Raimond Ravelli

2

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11 January 2020

Alexander Popov

3

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Anastassios C Papageorgiou

11 January 2020

4

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11 January 2020

author name string

Anatoly P Dubnovitsky

1

1 reference

11 September 2017

Raimond B G Ravelli

2

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11 September 2017

Alexander N Popov

3

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11 September 2017

Anastassios C Papageorgiou

4

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11 September 2017

9 May 2005

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11 January 2020

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11 January 2020

volume

14

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11 January 2020

issue

6

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11 January 2020

page(s)

1498-1507

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SHELXL: high-resolution refinement

11 January 2020

cites work

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Enzyme adaptation to alkaline pH: atomic resolution (1.08 A) structure of phosphoserine aminotransferase from Bacillus alcalophilus.

11 September 2017

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The CCP4 suite: programs for protein crystallography

11 September 2017

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Raster3D Version 2.0. A program for photorealistic molecular graphics

11 September 2017

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Pyridoxal phosphate enzymes: mechanistic, structural, and evolutionary considerations

11 September 2017

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Crystal structure of nickel-containing superoxide dismutase reveals another type of active site

11 September 2017

1 reference

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Heterogeneity and inaccuracy in protein structures solved by X-ray crystallography.

11 September 2017

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Strain and catalysis in aspartate aminotransferase

11 September 2017

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Specific damage induced by X-ray radiation and structural changes in the primary photoreaction of bacteriorhodopsin

11 September 2017

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Structural studies of Salmonella typhimurium ArnB (PmrH) aminotransferase: a 4-amino-4-deoxy-L-arabinose lipopolysaccharide-modifying enzyme

11 September 2017

1 reference

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Investigation of possible free-radical scavengers and metrics for radiation damage in protein cryocrystallography

11 September 2017

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The catalytic pathway of horseradish peroxidase at high resolution

11 September 2017

1 reference

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Crystal structure of the beta Ser178--> Pro mutant of tryptophan synthase. A "knock-out" allosteric enzyme

11 September 2017

1 reference

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Substrate recognition mechanism of thermophilic dual-substrate enzyme

11 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2253390

Strain is more important than electrostatic interaction in controlling the pKa of the catalytic group in aspartate aminotransferase

11 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2253390

Crystal structure of cystalysin from Treponema denticola: a pyridoxal 5'-phosphate-dependent protein acting as a haemolytic enzyme

11 September 2017

1 reference

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Structural changes in a cryo-cooled protein crystal owing to radiation damage

11 September 2017

1 reference

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The manifold of vitamin B6 dependent enzymes.

11 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2253390

Specific chemical and structural damage to proteins produced by synchrotron radiation

11 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2253390

XtalView/Xfit--A versatile program for manipulating atomic coordinates and electron density

11 September 2017

1 reference

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Remarks about protein structure precision

11 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2253390

Crystal structure of phosphoserine aminotransferase from Escherichia coli at 2.3 A resolution: comparison of the unligated enzyme and a complex with alpha-methyl-l-glutamate

11 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2253390

Structure, evolution and action of vitamin B6-dependent enzymes

11 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2253390

An extensively modified version of MolScript that includes greatly enhanced coloring capabilities

11 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2253390

Pyridoxal enzymes: mechanistic diversity and uniformity

11 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2253390

Retinal analog study of the role of steric interactions in the excited state isomerization dynamics of rhodopsin

11 September 2017

1 reference

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Radiation damage in protein crystals at low temperature

15 June 2018

1 reference

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Expression, purification, crystallization and preliminary crystallographic analysis of phosphoserine aminotransferase from Bacillus alcalophilus.

21 August 2018

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Characterization of histidinol phosphate aminotransferase from Escherichia coli

21 August 2018

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Structure of Superoxide Reductase Bound to Ferrocyanide and Active Site Expansion upon X-Ray-Induced Photo-Reduction

21 August 2018

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The 'fingerprint' that X-rays can leave on structures

2 December 2018

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12 December 2020

The substrate activation process in the catalytic reaction of Escherichia coli aromatic amino acid aminotransferase

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12 December 2020

Unit-cell volume change as a metric of radiation damage in crystals of macromolecules

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12 December 2020

Processing of X-ray diffraction data collected in oscillation mode

1 reference

12 December 2020

The imine-pyridine torsion of the pyridoxal 5'-phosphate Schiff base of aspartate aminotransferase lowers its pKa in the unliganded enzyme and is crucial for the successive increase in the pKa during catalysis

1 reference

12 December 2020

Identifiers

DOI

10.1110/PS.051397905

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15883191%20AND%20SRC:MED&resulttype=core&format=json

11 January 2020

1 reference

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11 January 2020

PubMed publication ID

15883191

1 reference