Gigwa-Genotype investigator for genome-wide analyses. (Q39445729)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27267926%20AND%20SRC:MED&resulttype=core&format=json

12 March 2020

title

Gigwa-Genotype investigator for genome-wide analyses (English)

1 reference

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Erratum to: Gigwa-Genotype investigator for genome-wide analyses

12 March 2020

main subject

data sharing

0 references

corrigendum / erratum

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author

Manuel Ruiz

4

1 reference

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12 March 2020

Pierre Larmande

6

1 reference

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12 March 2020

author name string

Guilhem Sempéré

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27267926%20AND%20SRC:MED&resulttype=core&format=json

12 March 2020

Florian Philippe

2

1 reference

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12 March 2020

Alexis Dereeper

3

1 reference

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12 March 2020

Gautier Sarah

5

1 reference

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12 March 2020

publication date

6 June 2016

1 reference

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12 March 2020

1 reference

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12 March 2020

volume

5

1 reference

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12 March 2020

page(s)

25

1 reference

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Quantitative trait loci for rice blast resistance detected in a local rice breeding population by genome-wide association mapping

12 March 2020

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4897896

OryzaGenome: Genome Diversity Database of Wild Oryza Species

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4897896

Genome Wide Association Mapping for Arabinoxylan Content in a Collection of Tetraploid Wheats

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4897896

Functional classification of 15 million SNPs detected from diverse chicken populations

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4897896

High dimensional biological data retrieval optimization with NoSQL technology

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4897896

SNP-Seek database of SNPs derived from 3000 rice genomes

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4897896

WhopGenome: high-speed access to whole-genome variation and sequence data in R.

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4897896

VariantAnnotation: a Bioconductor package for exploration and annotation of genetic variants

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4897896

CloudMan as a platform for tool, data, and analysis distribution

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4897896

A program for annotating and predicting the effects of single nucleotide polymorphisms, SnpEff: SNPs in the genome of Drosophila melanogaster strain w1118; iso-2; iso-3

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4897896

Relax with CouchDB--into the non-relational DBMS era of bioinformatics

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4897896

Integrative Genomics Viewer (IGV): high-performance genomics data visualization and exploration

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4897896

Knowledge engineering tools for reasoning with scientific observations and interpretations: a neural connectivity use case

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4897896

The variant call format and VCFtools

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4897896

SeqWare Query Engine: storing and searching sequence data in the cloud

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4897896

The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4897896

Searching for SNPs with cloud computing

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4897896

JBrowse: a next-generation genome browser

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4897896

CloudBurst: highly sensitive read mapping with MapReduce

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4897896

Galaxy: a platform for interactive large-scale genome analysis

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4897896

Joint genome-wide association study for milk fatty acid traits in Chinese and Danish Holstein populations.

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4897896

Sequencing of natural strains of Arabidopsis thaliana with short reads

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4897896

bam.iobio: a web-based, real-time, sequence alignment file inspector

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4897896

Whole-genome sequencing of multiple Arabidopsis thaliana populations.

21 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4897896

10.1186/S13742-016-0131-8

21 August 2018

Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27267926%20AND%20SRC:MED&resulttype=core&format=json

Dimensions Publication ID

12 March 2020

0 references

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27267926%20AND%20SRC:MED&resulttype=core&format=json

12 March 2020

PubMed publication ID

27267926

1 reference