An analysis of reaction pathways for proton tunnelling in methylamine dehydrogenase (Q39482505)

12 September 2017

An analysis of reaction pathways for proton tunnelling in methylamine dehydrogenase (English)

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12 September 2017

2

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12 September 2017

Sara Nuñez

1

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12 September 2017

Ian H Hillier

series ordinal

3

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12 September 2017

Neil A Burton

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4

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12 September 2017

language of work or name

English

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publication date

1 August 2006

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12 September 2017

12

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Philosophical Transactions of the Royal Society B

inferred from page(s)

published in

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12 September 2017

361

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12 September 2017

1472

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12 September 2017

1387-1398

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Structural bases of hydrogen tunneling in enzymes: progress and puzzles

12 September 2017

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1647307

Enzymes: By chance, or by design?

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1647307

Hydrogen tunneling in quinoproteins.

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1647307

Computer simulations of enzyme catalysis: methods, progress, and insights

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1647307

Direct dynamics calculations of reaction rate and kinetic isotope effects in enzyme catalysed reactions

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1647307

Environmentally coupled hydrogen tunneling. Linking catalysis to dynamics

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1647307

Barrier passage and protein dynamics in enzymatically catalyzed reactions

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1647307

A new conceptual framework for enzyme catalysis. Hydrogen tunnelling coupled to enzyme dynamics in flavoprotein and quinoprotein enzymes

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1647307

Quantum mechanical methods for enzyme kinetics

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1647307

Hydride transfer in liver alcohol dehydrogenase: quantum dynamics, kinetic isotope effects, and role of enzyme motion

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1647307

Triosephosphate isomerase: a theoretical comparison of alternative pathways

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1647307

Enzymatic H-transfer requires vibration-driven extreme tunneling

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1647307

Refined crystal structure of methylamine dehydrogenase from Paracoccus denitrificans at 1.75 A resolution

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1647307

Computer simulation of the triosephosphate isomerase catalyzed reaction

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1647307

Triosephosphate isomerase requires a positively charged active site: the role of lysine-12

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1647307

Enzyme catalysis: not different, just better

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1647307

Tunneling and coupled motion in the Escherichia coli dihydrofolate reductase catalysis

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1647307

The first experimental test of the hypothesis that enzymes have evolved to enhance hydrogen tunneling

21 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1647307

Active-site residues are critical for the folding and stability of methylamine dehydrogenase

21 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1647307

Importance of barrier shape in enzyme-catalyzed reactions. Vibrationally assisted hydrogen tunneling in tryptophan tryptophylquinone-dependent amine dehydrogenases

21 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1647307

A link between protein structure and enzyme catalyzed hydrogen tunneling

21 August 2018

1 reference

Crossref

https://api.crossref.org/works/10.1098%2FRSTB.2006.1867

Current Status of Transition-State Theory

21 January 2018

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Crossref

https://api.crossref.org/works/10.1098%2FRSTB.2006.1867

Deuterium and tritium exchange in enzyme kinetics

21 January 2018

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12 December 2020

Methylamine dehydrogenase of Pseudomonas AM1. A subunit enzyme

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12 December 2020

Electrostatic environment of the tryptophylquinone cofactor in methylamine dehydrogenase: evidence from resonance Raman spectroscopy of model compounds

1 reference

12 December 2020

Neutral imidazole is the electrophile in the reaction catalyzed by triosephosphate isomerase: structural origins and catalytic implications

1 reference

12 December 2020

Prediction of the mechanisms of enzyme-catalysed reactions using hybrid quantum mechanical/molecular mechanical methods

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12 December 2020

Computer simulation and analysis of the reaction pathway of triosephosphate isomerase

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12 December 2020

QM/MM studies show substantial tunneling for the hydrogen-transfer reaction in methylamine dehydrogenase

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12 December 2020

Quantum mechanics/molecular mechanics studies of triosephosphate isomerase-catalyzed reactions: effect of geometry and tunneling on proton-transfer rate constants

1 reference

12 December 2020

Rate-promoting vibrations and coupled hydrogen-electron transfer reactions in the condensed phase: a model for enzymatic catalysis

1 reference

12 December 2020

Identifiers

DOI

10.1098/RSTB.2006.1867

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12 September 2017

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12 September 2017

PubMed publication ID

16873126

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