Distinct functions of two RNA ligases in active Trypanosoma brucei RNA editing complexes. (Q39674967)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12052873%20AND%20SRC:MED&resulttype=core&format=json

9 November 2019

title

Distinct functions of two RNA ligases in active Trypanosoma brucei RNA editing complexes (English)

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9 November 2019

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1

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9 November 2019

author name string

Alevtina G Zhelonkina

series ordinal

2

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9 November 2019

Catherine E Huang

series ordinal

3

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9 November 2019

Barbara Sollner-Webb

series ordinal

4

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9 November 2019

language of work or name

English

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publication date

1 July 2002

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Molecular and Cellular Biology

9 November 2019

published in

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9 November 2019

volume

22

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9 November 2019

issue

13

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9 November 2019

page(s)

4652-4660

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RNA sequence and base pairing effects on insertion editing in Trypanosoma brucei

9 November 2019

cites work

1 reference

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Composition of the editing complex of Trypanosoma brucei

14 September 2017

1 reference

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Roles for ligases in the RNA editing complex of Trypanosoma brucei: band IV is needed for U-deletion and RNA repair.

14 September 2017

1 reference

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Identification of candidate mitochondrial RNA editing ligases from Trypanosoma brucei

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=133896

The two RNA ligases of the Trypanosoma brucei RNA editing complex: cloning the essential band IV gene and identifying the band V gene

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=133896

Trypanosome RNA editing: simple guide RNA features enhance U deletion 100-fold.

14 September 2017

1 reference

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Association of two novel proteins, TbMP52 and TbMP48, with the Trypanosoma brucei RNA editing complex

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=133896

Functions and mechanisms of RNA editing

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=133896

Uridylate addition and RNA ligation contribute to the specificity of kinetoplastid insertion RNA editing

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=133896

Kinetoplastid RNA-editing-associated protein 1 (REAP-1): a novel editing complex protein with repetitive domains.

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=133896

Association of guide RNA binding protein gBP21 with active RNA editing complexes in Trypanosoma brucei

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=133896

Trypanosoma brucei U insertion and U deletion activities co-purify with an enzymatic editing complex but are differentially optimized.

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=133896

The mechanism of U insertion/deletion RNA editing in kinetoplastid mitochondria

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=133896

RNA editing in kinetoplastid protozoa

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=133896

Trypanosome U-deletional RNA editing involves guide RNA-directed endonuclease cleavage, terminal U exonuclease, and RNA ligase activities

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=133896

RNA editing involves indiscriminate U changes throughout precisely defined editing domains

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=133896

A model for RNA editing in kinetoplastid mitochondria: "guide" RNA molecules transcribed from maxicircle DNA provide the edited information

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=133896

Processing of polycistronic guide RNAs is associated with RNA editing complexes in Trypanosoma brucei

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=133896

Uridine insertion into preedited mRNA by a mitochondrial extract from Leishmania tarentolae: stereochemical evidence for the enzyme cascade model

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=133896

Guide RNA-directed uridine insertion RNA editing in vitro

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=133896

Trypanosome RNA editing: resolved

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=133896

T. brucei RNA editing: adenosine nucleotides inversely affect U-deletion and U-insertion reactions at mRNA cleavage

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=133896

Purification of a functional enzymatic editing complex from Trypanosoma brucei mitochondria

15 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=133896

Guide RNAs in kinetoplastid mitochondria have a nonencoded 3′ oligo(U) tail involved in recognition of the preedited region

15 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=133896

Site-specific modification of pre-mRNA: the 2'-hydroxyl groups at the splice sites

15 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=133896

An RNA ligase essential for RNA editing and survival of the bloodstream form of Trypanosoma brucei

15 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=133896

Why do we need standard genetic nomenclature for parasite genes and gene products?

21 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=133896

Genetic nomenclature for Trypanosoma and Leishmania.

21 August 2018

1 reference

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Native gel analysis of ribonucleoprotein complexes from a Leishmania tarentolae mitochondrial extract

21 August 2018

1 reference

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RNA editing: a mechanism for gRNA-specified uridylate insertion into precursor mRNA.

21 August 2018

1 reference

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Direct visualization of uridylate deletion in vitro suggests a mechanism for kinetoplastid RNA editing

21 August 2018

1 reference

12 December 2020

RNA ligase and its involvement in guide RNA/mRNA chimera formation. Evidence for a cleavage-ligation mechanism of Trypanosoma brucei mRNA editing

1 reference

12 December 2020

Defining the editing 'reaction'

1 reference

12 December 2020

Unexpected electrophoretic migration of RNA with different 3' termini causes a RNA sizing ambiguity that can be resolved using nuclease P1-generated sequencing ladders

1 reference

12 December 2020

Ribonuclease activities of trypanosome RNA editing complex directed to cleave specifically at a chosen site

1 reference

12 December 2020

Direct sizing of RNA fragments using RNase-generated standards

1 reference

12 December 2020

Cycles of progressive realignment of gRNA with mRNA in RNA editing

1 reference

12 December 2020

RNA Editing: Transfer of Genetic Information from gRNA to Precursor mRNA in Vitro

1 reference

12 December 2020

10.1128/MCB.22.13.4652-4660.2002

Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12052873%20AND%20SRC:MED&resulttype=core&format=json

9 November 2019

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12052873%20AND%20SRC:MED&resulttype=core&format=json

9 November 2019

PubMed publication ID

12052873

1 reference