Substrate and mispairing properties of 5-formyl-2'-deoxyuridine 5'-triphosphate assessed by in vitro DNA polymerase reactions (Q39719727)

14 September 2017

Substrate and mispairing properties of 5-formyl-2'-deoxyuridine 5'-triphosphate assessed by in vitro DNA polymerase reactions (English)

1 reference

14 September 2017

Yoshida M

1

1 reference

14 September 2017

Makino K

2

1 reference

14 September 2017

Morita H

3

1 reference

14 September 2017

Terato H

4

1 reference

14 September 2017

Ohyama Y

5

1 reference

14 September 2017

Ide H

6

1 reference

14 September 2017

language of work or name

English

0 references

publication date

1 April 1997

1 reference

14 September 2017

Nucleic Acids Research

1 reference

14 September 2017

25

1 reference

14 September 2017

8

1 reference

14 September 2017

1570-1577

1 reference

The effects of the ring fragmentation product of thymidine C5-hydrate on phosphodiesterases and klenow (exo-) fragment

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=146632

A novel method for site specific introduction of single model oxidative DNA lesions into oligodeoxyribonucleotides

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=146632

Predominance of core histones in formation of DNA--protein crosslinks in gamma-irradiated chromatin

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=146632

57 Sequencing end-labeled DNA with base-specific chemical cleavages

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=146632

Codon--anticodon pairing: the wobble hypothesis

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=146632

Thymine glycols and urea residues in M13 DNA constitute replicative blocks in vitro.

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=146632

DNA sequencing with Thermus aquaticus DNA polymerase and direct sequencing of polymerase chain reaction-amplified DNA

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=146632

Dihydrothymidine and thymidine glycol triphosphates as substrates for DNA polymerases: differential recognition of thymine C5-C6 bond saturation and sequence specificity of incorporation.

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=146632

Site directed substitution of 5-hydroxymethyluracil for thymine in replicating phi X-174am3 DNA via synthesis of 5-hydroxymethyl-2'-deoxyuridine-5'-triphosphate

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=146632

Processing of DNA base damage by DNA polymerases. Dihydrothymine and beta-ureidoisobutyric acid as models for instructive and noninstructive lesions

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=146632

Synthesis of 5-substituted uracil derivatives

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=146632

The base catalysed anomerisation of beta-5-formyluridine; crystal and molecular structure of alpha-5-formyluridine

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=146632

Affinity labeling of Escherichia coli DNA-dependent RNA polymerase with 5-formyl-l-(alpha-D-ribofuranosyl)uracil 5'-triphosphate

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=146632

Comparative study of oxidation of nucleic acid components by hydroxyl radicals, singlet oxygen and superoxide anion radicals

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=146632

DNA precursors in chemical mutagenesis: a novel application of DNA sequencing

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=146632

Quantitative determination of the 5-(hydroxymethyl)uracil moiety in the DNA of gamma-irradiated cells.

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=146632

Synthesis of dihydrothymidine and thymidine glycol 5'-triphosphates and their ability to serve as substrates for Escherichia coli DNA polymerase I.

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=146632

Oxidative damage in DNA. Lack of mutagenicity by thymine glycol lesions.

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=146632

Effect of pH on the base-mispairing properties of 5-bromouracil during DNA synthesis

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=146632

Genetic effects of 5-hydroxymethyl-2'-deoxyuridine, a product of ionizing radiation.

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=146632

5-Formyldeoxyuridine: a new type of DNA damage induced by ionizing radiation and its mutagenicity to salmonella strain TA102.

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=146632

Synthesis and characterization of 5-hydroperoxymethyluracil (Thy.alpha.OOH)

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=146632

Radiation effects on DNA. The Silvanus Thompson Memorial Lecture, April 1982.

17 June 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2F25.8.1570

Thymine ring saturation and fragmentation products: lesion bypass, misinsertion and implications for mutagenesis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2F25.8.1570

Pyrimidine ring fragmentation products. Effects of lesion structure and sequence context on mutagenesis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2F25.8.1570

The specific mutagenic effect of base analogues on Phage T4

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2F25.8.1570

A proposed mechanism for the mutagenicity of 5-formyluracil.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=146632

DNA glycosylase activities for thymine residues oxidized in the methyl group are functions of the AlkA enzyme in Escherichia coli.

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=146632

Ionization of bromouracil and fluorouracil stimulates base mispairing frequencies with guanine

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=146632

Hydroxymethyluracil in eukaryote DNA: a natural feature of the pyrrophyta (dinoflagellates)

20 August 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2F25.8.1570

The new occurrence of a new pyrimidine base replacing thymine in a bacteriophage DNA:5-hydroxymethyl uracil

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2F25.8.1570

Modified bases in the DNAs of unicellular eukaryotes: an examination of distributions and possible roles, with emphasis on hydroxymethyluracil in dinoflagellates

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2F25.8.1570

Sensitized photo-oxidation of thymidine by 2-methyl-1,4-naphthoquinone. Characterization of the stable photoproducts

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2F25.8.1570

Nucleosides and nucleotides. 131. Synthesis and properties of oligonucleotides containing 5-formyl-2'-deoxyuridine

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2F25.8.1570

Enzymatic release of 5-formyluracil by mammalian liver extracts from DNA irradiated with ionizing radiation

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2F25.8.1570

Oxidation of thymine to 5-formyluracil in DNA: mechanisms of formation, structural implications, and base excision by human cell free extracts

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2F25.8.1570

Synthesis and properties of deoxyoligonucleotides containing putrescinylthymine (nucleosides and nucleotides. LXXVI)

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2F25.8.1570

Oxime and dithiolane derivatives of 5-formyl-2'-deoxyuridine and their 5'-phosphates: antivirial effects and thymidylate synthetase inhibition

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2F25.8.1570

CONVERSION OF MONO- AND OLIGODEOXYRIBONUCLEOTIDES TO 5-TRIPHOSPHATES

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2F25.8.1570

5-Formyl-UTP for DNA-dependent RNA polymerase

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2F25.8.1570

Response of human keratinocytes to extremely low concentrations of N-methyl-N'-nitro-N-nitrosoguanidine

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2F25.8.1570

DNA base modification: ionized base pairs and mutagenesis

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2F25.8.1570

Synthesis and characterization of oligonucleotides containing the alpha-anomer of deoxyadenosine to study its influence on DNA replication

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/9092664

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Polynucleotide analogues. VI. Physical studies on 5-substituted pyrimidine polynucleotides

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/9092664

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Dynamics of DNA duplexes containing internal G.T, G.A, A.C, and T.C pairs: hydrogen exchange at and adjacent to mismatch sites

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/9092664

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Synthesis of 5-Substituted Pyrimidines via Formaldehyde Addition¹

1 reference

19 October 2022

https://opencitations.net/index/coci/api/v1/citations/10.1021/JA01519A056

Identifiers

DOI

10.1093/NAR/25.8.1570

1 reference

14 September 2017

1 reference

14 September 2017

1 reference