A method adapting microarray technology for signature-tagged mutagenesis of Desulfovibrio desulfuricans G20 and Shewanella oneidensis MR-1 in anaerobic sediment survival experiments (Q39800694)

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English	A method adapting microarray technology for signature-tagged mutagenesis of Desulfovibrio desulfuricans G20 and Shewanella oneidensis MR-1 in anaerobic sediment survival experiments	scientific article

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scholarly article

1 reference

Europe PubMed Central

14 September 2017

A method adapting microarray technology for signature-tagged mutagenesis of Desulfovibrio desulfuricans G20 and Shewanella oneidensis MR-1 in anaerobic sediment survival experiments (English)

1 reference

Europe PubMed Central

14 September 2017

Shewanella oneidensis

object named as

Shewanella oneidensis

1 reference

based on heuristic

inferred from title

Desulfovibrio desulfuricans

object named as

Desulfovibrio desulfuricans

1 reference

based on heuristic

inferred from title

author name string

Jennifer L Groh

1

1 reference

Europe PubMed Central

14 September 2017

Qingwei Luo

2

1 reference

Europe PubMed Central

14 September 2017

Jimmy D Ballard

3

1 reference

Europe PubMed Central

14 September 2017

Lee R Krumholz

4

1 reference

Europe PubMed Central

14 September 2017

language of work or name

0 references

publication date

1 November 2005

1 reference

Europe PubMed Central

14 September 2017

Applied and Environmental Microbiology

1 reference

Europe PubMed Central

14 September 2017

71

1 reference

Europe PubMed Central

14 September 2017

11

1 reference

Europe PubMed Central

14 September 2017

7064-7074

1 reference

Europe PubMed Central

14 September 2017

Genetic transfer in Desulfovibrio desulfuricans

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1287673

22 September 2017

Availability of ferric iron for microbial reduction in bottom sediments of the freshwater tidal potomac river

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1287673

22 September 2017

Organic matter mineralization with reduction of ferric iron in anaerobic sediments

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1287673

22 September 2017

Role of chemotaxis in the ecology of denitrifiers

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1287673

22 September 2017

Dissimilatory Fe(III) and Mn(IV) reduction

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1287673

22 September 2017

Transposon-Based Strategies for Microbial Functional Genomics and Proteomics

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1287673

22 September 2017

Roles of NhaA, NhaB, and NhaD Na+/H+ antiporters in survival of Vibrio cholerae in a saline environment

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1287673

22 September 2017

Genome sequence of the dissimilatory metal ion–reducing bacterium Shewanella oneidensis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1287673

22 September 2017

Geobacter metallireducens accesses insoluble Fe(III) oxide by chemotaxis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1287673

22 September 2017

Desulfovibrio sp. genes involved in the respiration of sulfate during metabolism of hydrogen and lactate

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1287673

22 September 2017

Use of signature-tagged mutagenesis in pathogenesis studies

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1287673

22 September 2017

Application of high-density array-based signature-tagged mutagenesis to discover novel Yersinia virulence-associated genes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1287673

22 September 2017

Use of a transposon with luciferase as a reporter to identify environmentally responsive genes in a cyanobacterium

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1287673

22 September 2017

Anaerobic electron acceptor chemotaxis in Shewanella putrefaciens

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1287673

22 September 2017

Detection of genes essential in specific niches by signature-tagged mutagenesis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1287673

22 September 2017

In vivo genetic analysis of bacterial virulence

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1287673

22 September 2017

Functional characterization of the S. cerevisiae genome by gene deletion and parallel analysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1287673

22 September 2017

Strategies for isolation of in vivo expressed genes from bacteria

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1287673

22 September 2017

In vivo transposition of mariner-based elements in enteric bacteria and mycobacteria.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1287673

22 September 2017

Systematic identification of essential genes by in vitro mariner mutagenesis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1287673

22 September 2017

Plasposons: modular self-cloning minitransposon derivatives for rapid genetic analysis of gram-negative bacterial genomes.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1287673

22 September 2017

Expression monitoring by hybridization to high-density oligonucleotide arrays

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1287673

22 September 2017

Initiation of biofilm formation in Pseudomonas fluorescens WCS365 proceeds via multiple, convergent signalling pathways: a genetic analysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1287673

22 September 2017

Quantitative phenotypic analysis of yeast deletion mutants using a highly parallel molecular bar-coding strategy

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1287673

22 September 2017

Transposon mutagenesis in Desulfovibrio desulfuricans: development of a random mutagenesis tool from Tn7.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1287673

22 September 2017

A DNA microarray system for analyzing complex DNA samples using two-color fluorescent probe hybridization

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1287673

22 September 2017

Characterization of a small plasmid from Desulfovibrio desulfuricans and its use for shuttle vector construction

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1287673

22 September 2017

DcrA, a c-type heme-containing methyl-accepting protein from Desulfovibrio vulgaris Hildenborough, senses the oxygen concentration or redox potential of the environment

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1287673

22 September 2017

Metabolism of sulfate-reducing prokaryotes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1287673

22 September 2017

Simultaneous identification of bacterial virulence genes by negative selection.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1287673

22 September 2017

7 Uses of transposons with emphasis on Tn10

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1287673

22 September 2017

Use of signature-tagged transposon mutagenesis to identify Vibrio cholerae genes critical for colonization.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1287673

17 June 2018

Cloning and sequencing of the gene encoding cytochrome c3 from Desulfovibrio vulgaris (Hildenborough).

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1287673

17 June 2018

Microbial ecology of a shallow unconfined ground water aquifer polluted by municipal landfill leachate.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1287673

20 August 2018

Reduction of hexavalent uranium from organic complexes by sulfate- and iron-reducing bacteria.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1287673

20 August 2018

Identification of Campylobacter jejuni genes involved in commensal colonization of the chick gastrointestinal tract

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1287673

20 August 2018

In vivo functional genomics of Pseudomonas aeruginosa for high-throughput screening of new virulence factors and antibacterial targets

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1287673

20 August 2018

Identification of Xenorhabdus nematophila genes required for mutualistic colonization of Steinernema carpocapsae nematodes.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1287673

20 August 2018

Identification of novel factors involved in colonization and acid tolerance of Vibrio cholerae

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1287673

20 August 2018

A role for excreted quinones in extracellular electron transfer.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1287673

20 August 2018

Microarrays: biotechnology's discovery platform for functional genomics.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1287673

20 August 2018

Replication of plasmids with the p15A origin in Shewanella putrefaciens MR-1.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1287673

20 August 2018

Expression of the gene encoding cytochrome c3 from the sulfate-reducing bacterium Desulfovibrio vulgaris in the purple photosynthetic bacterium Rhodobacter sphaeroides

1 reference

https://pubmed.ncbi.nlm.nih.gov/16269742

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identification of novel pathogenicity genes by PCR signature-tagged mutagenesis and related technologies

1 reference

https://pubmed.ncbi.nlm.nih.gov/16269742

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Mini-Tn10 transposon derivatives for insertion mutagenesis and gene delivery into the chromosome of gram-negative bacteria

1 reference

https://pubmed.ncbi.nlm.nih.gov/16269742

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Environmental factors influencing methanogenesis in a shallow anoxic aquifer: a field and laboratory study

1 reference

https://pubmed.ncbi.nlm.nih.gov/16269742

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Bacterial manganese reduction and growth with manganese oxide as the sole electron acceptor

1 reference

https://pubmed.ncbi.nlm.nih.gov/16269742

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Defined oligonucleotide tag pools and PCR screening in signature-tagged mutagenesis of essential genes from bacteria

1 reference

https://pubmed.ncbi.nlm.nih.gov/16269742

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Overlapping transcription of the nifA regulatory gene in Rhizobium meliloti

1 reference

https://pubmed.ncbi.nlm.nih.gov/16269742

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Development of a gene cloning and inactivation system for halorespiring Desulfitobacterium dehalogenans

1 reference

https://pubmed.ncbi.nlm.nih.gov/16269742

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identification of Staphylococcus aureus virulence genes in a murine model of bacteraemia using signature-tagged mutagenesis

1 reference

https://pubmed.ncbi.nlm.nih.gov/16269742

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1128/AEM.71.11.7064-7074.2005

1 reference

Europe PubMed Central

14 September 2017

release_sqgtxw26hncgxdrg5lpttqw2um

0 references

1 reference

Europe PubMed Central

14 September 2017

1 reference

Europe PubMed Central

14 September 2017

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