Identification of patterns in biological sequences at the ALGGEN server: PROMO and MALGEN. (Q39804548)

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5 November 2019

title

Identification of patterns in biological sequences at the ALGGEN server: PROMO and MALGEN (English)

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5 November 2019

1

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5 November 2019

José E Adsuara

4

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5 November 2019

Mar Albà Soler

6

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5 November 2019

author name string

Romà Roset

2

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5 November 2019

Mario Huerta

3

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5 November 2019

Llorenç Roselló

5

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5 November 2019

Xavier Messeguer

7

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5 November 2019

language of work or name

English

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publication date

1 July 2003

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5 November 2019

published in

Nucleic Acids Research

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5 November 2019

volume

31

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5 November 2019

issue

13

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5 November 2019

page(s)

3651-3653

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TRANSFAC: transcriptional regulation, from patterns to profiles

5 November 2019

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=169011

Fast algorithms for large-scale genome alignment and comparison

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=169011

PROMO: detection of known transcription regulatory elements using species-tailored searches

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=169011

Large-scale gene expression data analysis: a new challenge to computational biologists.

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=169011

Alignment of whole genomes

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=169011

MatInd and MatInspector: new fast and versatile tools for detection of consensus matches in nucleotide sequence data

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=169011

Weight matrix descriptions of four eukaryotic RNA polymerase II promoter elements derived from 502 unrelated promoter sequences

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=169011

Genome-wide analysis of the Emigrant family of MITEs of Arabidopsis thaliana.

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=169011

Muscle-specific expression of the cardiac alpha-actin gene requires MyoD1, CArG-box binding factor, and Sp1.

15 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=169011

Efficient multiple genome alignment.

15 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=169011

Evaluation of computer tools for the prediction of transcription factor binding sites on genomic DNA.

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=169011

20 August 2018

Identifiers

DOI

10.1093/NAR/GKG605

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12824386%20AND%20SRC:MED&resulttype=core&format=json

journals/nar/FarreRHARAM03

5 November 2019

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

28 January 2021

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5 November 2019

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