Role of curved DNA in binding of Escherichia coli RNA polymerase to promoters (Q39838661)

15 September 2017

Role of curved DNA in binding of Escherichia coli RNA polymerase to promoters (English)

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15 September 2017

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Nickerson CA

1

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PMCID

177394

15 September 2017

Achberger EC

series ordinal

2

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15 September 2017

1 October 1995

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15 September 2017

Journal of Bacteriology

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15 September 2017

177

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15 September 2017

20

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15 September 2017

5756-5761

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Sigma s-dependent promoters in Escherichia coli are located in DNA regions with intrinsic curvature

15 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=177394

A third recognition element in bacterial promoters: DNA binding by the alpha subunit of RNA polymerase

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=177394

Promoters responsive to DNA bending: a common theme in prokaryotic gene expression

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=177394

Molecular sequestration stabilizes CAP-DNA complexes during polyacrylamide gel electrophoresis.

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=177394

Escherichia colipromoter sequences predictin vitroRNA polymerase selectivity

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=177394

Escherichia coliΔ1-pyrroline-5-carboxylate reductase: gene sequence, protein overproduction and purification

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=177394

The pUC plasmids, an M13mp7-derived system for insertion mutagenesis and sequencing with synthetic universal primers

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=177394

The effect of the delta snbunit on the interaction ofBacillus subtilisRNA polymerase with bases in a SP82 early gene promoter

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=177394

57 Sequencing end-labeled DNA with base-specific chemical cleavages

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=177394

Identification, nucleotide sequence and expression of the regulatory region of the histidine operon of Escherichia coli K-12

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=177394

Rigorous pattern-recognition methods for DNA sequences. Analysis of promoter sequences from Escherichia coli

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=177394

Sequence distributions associated with DNA curvature are found upstream of strong E. coli promoters

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=177394

Synthetic curved DNA sequences can act as transcriptional activators in Escherichia coli

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=177394

Synthetic DNA bending sequences increase the rate of in vitro transcription initiation at the Escherichia coli lac promoter

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=177394

Unusual properties of promoter-up mutations in the Escherichia coli galactose operon and evidence suggesting RNA polymerase-induced DNA bending

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=177394

The hisR locus of Salmonella: Nucleotide sequence and expression

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=177394

Enhancement of transcriptional activity of the Escherichia coli trp promoter by upstream A + T-rich regions.

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=177394

Effect of polyadenine-containing curved DNA on promoter utilization in Bacillus subtilis

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=177394

Rotational orientation of upstream curved DNA affects promoter function in Bacillus subtilis

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=177394

Integration host factor stimulates the phage lambda pL promoter

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=177394

Upstream sequence activation of Escherichia coli argT promoter in vivo and in vitro.

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=177394

Gene organization and primary structure of a ribosomal RNA operon from Escherichia coli.

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=177394

Requirement for an upstream element for optimal transcription of a bacterial tRNA gene

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=177394

Conformational change in the DNA associated with an unusual promoter mutation in a tRNA operon of Salmonella.

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=177394

Nucleotide sequence of a promoter recognized by Bacillus subtilis RNA polymerase

20 August 2018

1 reference

12 December 2020

Deletion analysis of a complex promoter for a developmentally regulated gene from Bacillus subtilis

1 reference

12 December 2020

Static bend of DNA helix at the activator recognition site of the ompF promoter in Escherichia coli

1 reference

12 December 2020

The interaction of Escherichia coli core RNA polymerase with specificity-determining subunits derived from unmodified and SP82-modified Bacillus subtilis RNA polymerase

1 reference

12 December 2020

10.1128/JB.177.20.5756-5761.1995

Identifiers

DOI

1 reference

15 September 2017

1 reference

15 September 2017

1 reference

PMCID

177394