The downstream atpE cistron is efficiently translated via its own cis-element in partially overlapping atpB-atpE dicistronic mRNAs in chloroplasts (Q39888757)

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English	The downstream atpE cistron is efficiently translated via its own cis-element in partially overlapping atpB-atpE dicistronic mRNAs in chloroplasts	scientific article

Statements

scholarly article

1 reference

Europe PubMed Central

PMC publication ID

15 September 2017

The downstream atpE cistron is efficiently translated via its own cis-element in partially overlapping atpB-atpE dicistronic mRNAs in chloroplasts (English)

1 reference

Europe PubMed Central

PMC publication ID

15 September 2017

author name string

Haruka Suzuki

1

1 reference

Europe PubMed Central

PMC publication ID

15 September 2017

Hiroshi Kuroda

2

1 reference

Europe PubMed Central

PMC publication ID

15 September 2017

Yasushi Yukawa

3

1 reference

Europe PubMed Central

PMC publication ID

15 September 2017

Masahiro Sugiura

4

1 reference

Europe PubMed Central

PMC publication ID

15 September 2017

publication date

16 August 2011

1 reference

Europe PubMed Central

PMC publication ID

15 September 2017

Nucleic Acids Research

1 reference

Europe PubMed Central

PMC publication ID

15 September 2017

39

1 reference

Europe PubMed Central

PMC publication ID

15 September 2017

21

1 reference

Europe PubMed Central

PMC publication ID

15 September 2017

9405-9412

1 reference

Europe PubMed Central

PMC publication ID

15 September 2017

copyright license

Creative Commons Attribution-NonCommercial 3.0 Unported

4 October 2016

1 reference

April 2022 Public Data File from Crossref

copyright status

0 references

Chloroplast RNA metabolism

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3241655

22 September 2017

Termination codon-dependent translation of partially overlapping ndhC-ndhK transcripts in chloroplasts

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3241655

22 September 2017

Characterization of the termination-reinitiation strategy employed in the expression of influenza B virus BM2 protein

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3241655

22 September 2017

Translational control of photosynthetic gene expression in phototrophic eukaryotes.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3241655

22 September 2017

Chloroplast translation regulation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3241655

22 September 2017

Translational coupling of the maize chloroplast atpB and atpE genes.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3241655

22 September 2017

Structures of the genes for the beta and epsilon subunits of spinach chloroplast ATPase indicate a dicistronic mRNA and an overlapping translation stop/start signal

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3241655

22 September 2017

The complete nucleotide sequence of the tobacco chloroplast genome: its gene organization and expression.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3241655

22 September 2017

Functional Shine-Dalgarno-like sequences for translational initiation of chloroplast mRNAs.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3241655

22 September 2017

Chloroplast RNA-binding proteins.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3241655

22 September 2017

Molecular spectroscopy and dynamics of intrinsically fluorescent proteins: coral red (dsRed) and yellow (Citrine).

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3241655

22 September 2017

Role of ribosome recycling factor (RRF) in translational coupling

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3241655

22 September 2017

The two RNA polymerases encoded by the nuclear and the plastid compartments transcribe distinct groups of genes in tobacco plastids

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3241655

22 September 2017

FACS-optimized mutants of the green fluorescent protein (GFP)

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3241655

22 September 2017

The maize chloroplast genes for the β and ε subunits of the photosynthetic factor CF1are fused

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3241655

22 September 2017

Sequence of the intercistronic region between the ribulose-1,5-bishphosphate carboxylase/oxgenase large subunit and the coupling factor β subunit gene

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3241655

22 September 2017

The complete sequence of the rice (Oryza sativa) chloroplast genome: intermolecular recombination between distinct tRNA genes accounts for a major plastid DNA inversion during the evolution of the cereals

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3241655

22 September 2017

Proteins encoded by a complex chloroplast transcription unit are each translated from both monocistronic and polycistronic mRNAs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3241655

22 September 2017

The chloroplast genome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3241655

22 September 2017

Multiple elements required for translation of plastid atpB mRNA lacking the Shine-Dalgarno sequence.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3241655

25 September 2017

Coordination of nuclear and chloroplast gene expression in plant cells.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3241655

15 June 2018

Control of plastid gene expression during development: the limited role of transcriptional regulation.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3241655

15 June 2018

A gene cluster in the spinach and pea chloroplast genomes encoding one CF1 and three CF0 subunits of the H+-ATP synthase complex and the ribosomal protein S2.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3241655

15 June 2018

The divergently transcribed rbcL and atpB genes of tobacco plastid DNA are separated by nineteen base pairs.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3241655

15 June 2018

Rapid splicing and stepwise processing of a transcript from the psbB operon in tobacco chloroplasts: determination of the intron sites in petB and petD.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3241655

20 August 2018

A new in vitro translation system for non-radioactive assay from tobacco chloroplasts: effect of pre-mRNA processing on translation in vitro.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3241655

20 August 2018

Expression of the Large ATP Synthase Gene Cluster in Spinach Plastids during Light-Induced Development.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3241655

20 August 2018

A role of the -35 element in the initiation of transcription at psbA promoter in tobacco plastids.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3241655

20 August 2018

Ribosomes pause during the expression of the large ATP synthase gene cluster in spinach chloroplasts

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3241655

20 August 2018

Overlap and cotranscription of the genes for the beta and epsilon subunits of tobacco chloroplast ATPase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3241655

20 August 2018

Translation of psbC mRNAs starts from the downstream GUG, not the upstream AUG, and requires the extended Shine-Dalgarno sequence in tobacco chloroplasts

1 reference

https://pubmed.ncbi.nlm.nih.gov/21846772

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Evolution and mechanism of translation in chloroplasts

1 reference

https://pubmed.ncbi.nlm.nih.gov/21846772

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identification and functional significance of a new class of non-consensus-type plastid promoters

1 reference

https://pubmed.ncbi.nlm.nih.gov/21846772

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A primary transcript in spinach chloroplasts that completely lacks a 5′ untranslated leader region

1 reference

https://pubmed.ncbi.nlm.nih.gov/21846772

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

rbcL Transcript levels in tobacco plastids are independent of light: reduced dark transcription rate is compensated by increased mRNA stability

1 reference

https://pubmed.ncbi.nlm.nih.gov/21846772

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Efficient translation in chloroplasts requires element(s) upstream of the putative ribosome binding site from atpI

1 reference

https://pubmed.ncbi.nlm.nih.gov/21846772

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Sequences downstream of the translation initiation codon are important determinants of translation efficiency in chloroplasts

1 reference

https://pubmed.ncbi.nlm.nih.gov/21846772

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

An atpE-specific promoter within the coding region of the atpB gene in tobacco chloroplast DNA

1 reference

https://pubmed.ncbi.nlm.nih.gov/21846772

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A nuclear gene in maize required for the translation of the chloroplast atpB/E mRNA

1 reference

https://pubmed.ncbi.nlm.nih.gov/21846772

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The biogenesis and assembly of photosynthetic proteins in thylakoid membranes1

1 reference

https://pubmed.ncbi.nlm.nih.gov/21846772

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Complex RNA maturation in chloroplasts. The psbB operon from spinach

1 reference

https://pubmed.ncbi.nlm.nih.gov/21846772

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Six chloroplast genes (ndhA-F) homologous to human mitochondrial genes encoding components of the respiratory chain NADH dehydrogenase are actively expressed: Determination of the splice sites in ndhA and ndhB pre-mRNAs

1 reference

https://pubmed.ncbi.nlm.nih.gov/21846772

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Transcript analysis of the tobacco plastid operon rps2/atpI/H/F/A reveals the existence of a non-consensus type II (NCII) promoter upstream of the atpI coding sequence

1 reference

https://pubmed.ncbi.nlm.nih.gov/21846772

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Proteins are shared among RNA-protein complexes that form in the 5' untranslated regions of spinach chloroplast mRNAs

1 reference

https://pubmed.ncbi.nlm.nih.gov/21846772

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1093/NAR/GKR644

1 reference

Europe PubMed Central

PMC publication ID

15 September 2017

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

15 September 2017

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

15 September 2017

ResearchGate publication ID

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