Digital expression profiling of novel diatom transcripts provides insight into their biological functions (Q39947727)

15 September 2017

Digital expression profiling of novel diatom transcripts provides insight into their biological functions (English)

1 reference

Micaela Schnitzler Parker

15 September 2017

Uma Maheswari

1

0 references

Micaela Schnitzler Parker

Véronique Martin-Jézéquel

15

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Véronique Martin-Jézéquel

12

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Thomas Mock

Thomas Mock

14

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Chris Bowler

Chris Bowler

20

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Pascal Jean Lopez

Pascal J Lopez

11

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Jean Weissenbach

18

Jean Weissenbach

1 reference

15 September 2017

17

E Virginia Armbrust

1 reference

15 September 2017

Betina M Porcel

4

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Assaf Vardi

Assaf Vardi

16

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Andrew E. Allen

5

Andrew E Allen

1 reference

15 September 2017

6

Jean-Paul Cadoret

1 reference

15 September 2017

Kamel Jabbari

2

1 reference

15 September 2017

Jean-Louis Petit

3

1 reference

15 September 2017

Alessandra De Martino

7

1 reference

15 September 2017

Marc Heijde

8

1 reference

15 September 2017

Raymond Kaas

9

1 reference

15 September 2017

Julie La Roche

10

1 reference

15 September 2017

Agnès Meichenin

13

1 reference

15 September 2017

Michaël Katinka

19

1 reference

15 September 2017

25 August 2010

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15 September 2017

1 reference

15 September 2017

11

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15 September 2017

8

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15 September 2017

R85

1 reference

Potential impact of stress activated retrotransposons on genome evolution in a marine diatom

15 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2945787

Chromatin indexing in Arabidopsis: an epigenomic tale of tails and more

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2945787

Genomic footprints of a cryptic plastid endosymbiosis in diatoms

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2945787

Gene silencing in the marine diatom Phaeodactylum tricornutum

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2945787

Update of the Diatom EST Database: a new tool for digital transcriptomics

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2945787

The Phaeodactylum genome reveals the evolutionary history of diatom genomes

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2945787

Whole-cell response of the pennate diatom Phaeodactylum tricornutum to iron starvation

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2945787

Annotating genes of known and unknown function by large-scale coexpression analysis

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2945787

''R"--project for statistical computing

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2945787

Whole-genome expression profiling of the marine diatom Thalassiosira pseudonana identifies genes involved in silicon bioprocesses

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2945787

The Chlamydomonas genome reveals the evolution of key animal and plant functions

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2945787

New developments in the InterPro database

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2945787

What makes species unique? The contribution of proteins with obscure features

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2945787

An ecological and evolutionary context for integrated nitrogen metabolism and related signaling pathways in marine diatoms

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2945787

A stress surveillance system based on calcium and nitric oxide in marine diatoms.

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2945787

Blast2GO: a universal tool for annotation, visualization and analysis in functional genomics research

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2945787

Comparative genomics of the pennate diatom Phaeodactylum tricornutum

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2945787

22 September 2017

The Diatom EST Database

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2945787

CDD: a Conserved Domain Database for protein classification

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2945787

Gene replacement of fructose-1,6-bisphosphate aldolase supports the hypothesis of a single photosynthetic ancestor of chromalveolates

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2945787

The Genome of the Diatom Thalassiosira Pseudonana: Ecology, Evolution, and Metabolism

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2945787

Java Treeview--extensible visualization of microarray data

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2945787

Genome sequence of the ultrasmall unicellular red alga Cyanidioschyzon merolae 10D

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2945787

A molecular timeline for the origin of photosynthetic eukaryotes

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2945787

The Gene Ontology (GO) database and informatics resource

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2945787

The COG database: an updated version includes eukaryotes

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2945787

Genome properties of the diatom Phaeodactylum tricornutum

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2945787

The comparison of gene expression from multiple cDNA libraries

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2945787

CAP3: A DNA sequence assembly program

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2945787

Cluster analysis and display of genome-wide expression patterns

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2945787

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2945787

Stable nuclear transformation of the diatom Phaeodactylum tricornutum

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2945787

The codon Adaptation Index--a measure of directional synonymous codon usage bias, and its potential applications

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2945787

Estimating the population size for capture-recapture data with unequal catchability

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2945787

Plasticity and robustness of pattern formation in the model diatom Phaeodactylum tricornutum

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2945787

A diatom gene regulating nitric-oxide signaling and susceptibility to diatom-derived aldehydes

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2945787

CO2 sensing at ocean surface mediated by cAMP in a marine diatom

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2945787

Copper-containing plastocyanin used for electron transport by an oceanic diatom

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2945787

Localization of soluble beta-carbonic anhydrase in the marine diatom Phaeodactylum tricornutum. Sorting to the chloroplast and cluster formation on the girdle lamellae.

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2945787

Identification and characterization of a new conserved motif within the presequence of proteins targeted into complex diatom plastids

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2945787

Aldehyde suppression of copepod recruitment in blooms of a ubiquitous planktonic diatom

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2945787

Perception of Environmental Signals by a Marine Diatom

20 August 2018

1 reference

12 December 2020

The effects of colchicine on cellular organization in Chlamydomonas. I. Light microscopy and cytochemistry

1 reference

12 December 2020

POFs: what we don't know can hurt us

1 reference

12 December 2020

Transformation of Nonselectable Reporter Genes in Marine Diatoms

1 reference

12 December 2020

Molecular toolbox for studying diatom biology in Phaeodactylum tricornutum

1 reference

12 December 2020

A mesoscale iron enrichment in the western subarctic Pacific induces a large centric diatom bloom

1 reference

12 December 2020

Identifiers

DOI

10.1186/GB-2010-11-8-R85

1 reference

Dimensions Publication ID

15 September 2017

0 references

1 reference

15 September 2017

PubMed publication ID

20738856

1 reference