CASSIS and SMIPS: promoter-based prediction of secondary metabolite gene clusters in eukaryotic genomes (Q39951322)

15 September 2017

CASSIS and SMIPS: promoter-based prediction of secondary metabolite gene clusters in eukaryotic genomes (English)

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15 September 2017

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Thomas Wolf

1

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15 September 2017

Vladimir Shelest

series ordinal

2

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15 September 2017

Neetika Nath

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3

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15 September 2017

Ekaterina Shelest

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4

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15 September 2017

language of work or name

English

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publication date

9 December 2015

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15 September 2017

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15 September 2017

32

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15 September 2017

8

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15 September 2017

1138-1143

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Creative Commons Attribution-NonCommercial 4.0 International

15 September 2017

start time

12 October 2016

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April 2023 Public Data File from Crossref

copyright status

copyrighted

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cites work

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Accurate prediction of secondary metabolite gene clusters in filamentous fungi

22 September 2017

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Regulation of fungal secondary metabolism

22 September 2017

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Evolutionary imprint of catalytic domains in fungal PKS-NRPS hybrids

22 September 2017

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22 September 2017

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FIMO: scanning for occurrences of a given motif

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4824125

Fungal secondary metabolites - strategies to activate silent gene clusters

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4824125

MEME SUITE: tools for motif discovery and searching

22 September 2017

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4824125

Natural products of filamentous fungi: enzymes, genes, and their regulation

22 September 2017

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Exploitation of the selectivity-conferring code of nonribosomal peptide synthetases for the rational design of novel peptide antibiotics

22 September 2017

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The specificity-conferring code of adenylation domains in nonribosomal peptide synthetases

22 September 2017

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Fitting a mixture model by expectation maximization to discover motifs in biopolymers

22 September 2017

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Activation of a silent fungal polyketide biosynthesis pathway through regulatory cross talk with a cryptic nonribosomal peptide synthetase gene cluster

22 September 2017

1 reference

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antiSMASH 2.0--a versatile platform for genome mining of secondary metabolite producers

25 September 2017

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SMURF: Genomic mapping of fungal secondary metabolite clusters

17 June 2018

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CLUSEAN: a computer-based framework for the automated analysis of bacterial secondary metabolite biosynthetic gene clusters.

17 June 2018

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ClustScan: an integrated program package for the semi-automatic annotation of modular biosynthetic gene clusters and in silico prediction of novel chemical structures

20 August 2018

1 reference

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The GC and window-averaged DNA curvature profile of secondary metabolite gene cluster in Aspergillus fumigatus genome.

20 August 2018

1 reference

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Metabolic pathway gene clusters in filamentous fungi

20 August 2018

1 reference

Crossref

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTV713

10.1093/BIOINFORMATICS/BTV713

21 January 2018

Identifiers

DOI

1 reference

journals/bioinformatics/WolfSNS16

15 September 2017

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DBLP Dataset 2021-01-02

28 January 2021

1 reference

15 September 2017

1 reference