Neuromantic - from semi-manual to semi-automatic reconstruction of neuron morphology (Q40027322)

16 September 2017

Neuromantic - from semi-manual to semi-automatic reconstruction of neuron morphology (English)

1 reference

16 September 2017

1 reference

Slawomir J Nasuto

4

0 references

Giorgio A. Ascoli

series ordinal

3

object named as

Giorgio A Ascoli

1 reference

16 September 2017

Darren R Myatt

1

1 reference

PMCID

3305991

16 September 2017

Tye Hadlington

series ordinal

2

1 reference

16 September 2017

16 March 2012

1 reference

Frontiers in Neuroinformatics

16 September 2017

1 reference

16 September 2017

6

1 reference

16 September 2017

4

1 reference

Automated reconstruction of neuronal morphology based on local geometrical and global structural models

16 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3305991

The DIADEM metric: comparing multiple reconstructions of the same neuron

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3305991

Neuronal tracing for connectomic studies

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3305991

The DIADEM data sets: representative light microscopy images of neuronal morphology to advance automation of digital reconstructions

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3305991

Axonal morphometry of hippocampal pyramidal neurons semi-automatically reconstructed after in vivo labeling in different CA3 locations.

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3305991

Automated reconstruction of neuronal morphology: an overview.

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3305991

Neuron tracing in perspective

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3305991

Impact of dendritic size and dendritic topology on burst firing in pyramidal cells

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3305991

L-Measure: a web-accessible tool for the analysis, comparison and search of digital reconstructions of neuronal morphologies

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3305991

NeuroMorpho.Org: a central resource for neuronal morphologies.

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3305991

Mobilizing the base of neuroscience data: the case of neuronal morphologies

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3305991

A cross-platform freeware tool for digital reconstruction of neuronal arborizations from image stacks

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3305991

Automated reconstruction of three-dimensional neuronal morphology from laser scanning microscopy images

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3305991

Neuronal morphology data bases: morphological noise and assesment of data quality

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3305991

Dendritic anomalies in disorders associated with mental retardation

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3305991

An on-line archive of reconstructed hippocampal neurons

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3305991

Two-photon laser scanning fluorescence microscopy

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3305991

Automated neurite extraction using dynamic programming for high-throughput screening of neuron-based assays.

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3305991

Automated tracing of neurites from light microscopy stacks of images

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3305991

A comparison of the muscarinic response and morphological properties of identified cells in the guinea-pig olfactory cortex in vitro

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3305991

Automated reconstruction of dendritic and axonal trees by global optimization with geometric priors.

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3305991

3-D image pre-processing algorithms for improved automated tracing of neuronal arbors.

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3305991

20 August 2018

The DIADEM and beyond

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3305991

A broadly applicable 3-D neuron tracing method based on open-curve snake.

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3305991

Principal curves as skeletons of tubular objects: locally characterizing the structures of axons

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3305991

The past, present, and future of single neuron reconstruction.

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3305991

Proof-editing is the bottleneck of 3D neuron reconstruction: the problem and solutions.

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3305991

Further characterization of muscarinic agonist-induced epileptiform bursting activity in immature rat piriform cortex, in vitro

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3305991

Quantitative morphometry of hippocampal pyramidal cells: differences between anatomical classes and reconstructing laboratories

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3305991

Computer generation and quantitative morphometric analysis of virtual neurons.

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3305991

Interactive live-wire boundary extraction.

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3305991

A quantitative anatomical study of the granule cell dendritic fields of the rat dentate gyrus using a novel probabilistic method.

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3305991

A brief history of neuronal reconstruction

20 August 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22438842

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Design and validation of a tool for neurite tracing and analysis in fluorescence microscopy images

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22438842

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.3389/FNINF.2012.00004

1 reference

16 September 2017

journals/fini/MyattHAN12

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

16 September 2017

1 reference

PMCID

3305991