Pyrimidine phosphorothioate oligonucleotides form triple-stranded helices and promote transcription inhibition. (Q40230335)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:8078767%20AND%20SRC:MED&resulttype=core&format=json

24 October 2019

title

Pyrimidine phosphorothioate oligonucleotides form triple-stranded helices and promote transcription inhibition (English)

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24 October 2019

1

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24 October 2019

author name string

M Alunni-Fabbroni

series ordinal

2

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24 October 2019

G Manzini

series ordinal

3

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24 October 2019

F Quadrifoglio

series ordinal

4

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24 October 2019

publication date

1 August 1994

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24 October 2019

published in

Nucleic Acids Research

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24 October 2019

volume

22

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issue

16

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24 October 2019

page(s)

3322-3330

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Sequence-specific DNA-triplex formation at imperfect homopurine-homopyrimidine sequences within a DNA plasmid.

24 October 2019

cites work

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Evidence for sequence-specific conformational changes in DNA from the melting temperatures of DNA phosphorothioate derivatives.

22 September 2017

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22 September 2017

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22 September 2017

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22 September 2017

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22 September 2017

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22 September 2017

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Physicochemical properties of phosphorothioate oligodeoxynucleotides

22 September 2017

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Regiospecific inhibition of DNA duplication by antisense phosphate-methylated oligodeoxynucleotides

22 September 2017

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Triple-strand formation in the homopurine:homopyrimidine DNA oligonucleotides d(G-A)4 and d(T-C)4

22 September 2017

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Inhibition of human immunodeficiency virus in early infected and chronically infected cells by antisense oligodeoxynucleotides and their phosphorothioate analogues

22 September 2017

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Phosphorothioates in molecular biology

22 September 2017

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Nucleoside phosphorothioates

22 September 2017

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Spectroscopic and calorimetric investigation on the DNA triplex formed by d(CTCTTCTTTCTTTTCTTTCTTCTC) and d(GAGAAGAAAGA) at acidic pH

22 September 2017

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Triple helix formation by oligopurine-oligopyrimidine DNA fragments. Electrophoretic and thermodynamic behavior

22 September 2017

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Thermodynamic characterization of the stability and the melting behavior of a DNA triplex: a spectroscopic and calorimetric study

22 September 2017

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Thermodynamics of triple helix formation: spectrophotometric studies on the d(A)10.2d(T)10 and d(C+3T4C+3).d(G3A4G3).d(C3T4C3) triple helices

22 September 2017

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Inhibition of simian virus 40 DNA replication in CV-1 cells by an oligodeoxynucleotide covalently linked to an intercalating agent

22 September 2017

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Intramolecular triplex formation of the purine.purine.pyrimidine type

22 September 2017

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A rapid method for the purification of deprotected oligodeoxynucleotides

22 September 2017

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Second structural motif for recognition of DNA by oligonucleotide-directed triple-helix formation

22 September 2017

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Triple helix formation inhibits transcription elongation in vitro

22 September 2017

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Specificity and stringency in DNA triplex formation

22 September 2017

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22 September 2017

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Evidence that a triplex-forming oligodeoxyribonucleotide binds to the c-myc promoter in HeLa cells, thereby reducing c-myc mRNA levels

22 September 2017

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Analysis of promoter-specific repression by triple-helical DNA complexes in a eukaryotic cell-free transcription system

22 September 2017

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Specific inhibition of transcription by triple helix-forming oligonucleotides

22 September 2017

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Duplex stabilities of phosphorothioate, methylphosphonate, and RNA analogs of two DNA 14-mers

22 September 2017

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Specific regulation of gene expression by antisense, sense and antigene nucleic acids

22 September 2017

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Oligonucleotide-mediated triple helix formation using an N3-protonated deoxycytidine analog exhibiting pH-independent binding within the physiological range

22 September 2017

1 reference

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Inhibition of transcription of HIV-1 in infected human cells by oligodeoxynucleotides designed to form DNA triple helices

22 September 2017

1 reference

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Influence of pH on the equilibrium association constants for oligodeoxyribonucleotide-directed triple helix formation at single DNA sites

22 September 2017

1 reference

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Inhibition of human immunodeficiency virus activity by phosphorodithioate oligodeoxycytidine

22 September 2017

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Oligonucleoside methylphosphonates as antisense reagents

22 September 2017

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Complexes formed by (pyrimidine)n·(purine)nDNAs on lowering the pH are three-stranded

22 September 2017

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DNA H form requires a homopurine-homopyrimidine mirror repeat.

22 September 2017

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Phosphorothioate oligonucleotide-directed triple helix formation.

25 September 2017

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Structures for the polynucleotide complexes poly(dA) with poly (dT) and poly(dT) with poly(dA) with poly (dT).

17 June 2018

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Sequence-specific cleavage of double helical DNA by triple helix formation.

17 June 2018

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Structure, stability, and thermodynamics of a short intermolecular purine-purine-pyrimidine triple helix

17 June 2018

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Assignment of resonances in the phosphorus-31 nuclear magnetic resonance spectrum of poly[d(A-T)] from phosphorothioate substitution

17 June 2018

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12 December 2020

Synthesis and characterization of an octanucleotide containing the EcoRI recognition sequence with a phosphorothioate group at the cleavage site

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12 December 2020

Oligodeoxynucleotide stability in subcellular extracts and culture media

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12 December 2020

NMR studies of DNA (R+)n.(Y-)n.(Y+)n triple helices in solution: imino and amino proton markers of T.A.T and C.G.C+ base-triple formation

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12 December 2020

The influence of oligodeoxyribonucleotide phosphorothioate pyrimidine strands on triplex formation

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12 December 2020

Capped oligodeoxynucleotide phosphorothioates. Pharmacokinetics and stability in mice

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12 December 2020

Specificity of the three-stranded complex formation between double-stranded DNA and single-stranded RNA containing repeating nucleotide sequences

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12 December 2020

Identifiers

DOI

10.1093/NAR/22.16.3322

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:8078767%20AND%20SRC:MED&resulttype=core&format=json

24 October 2019

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:8078767%20AND%20SRC:MED&resulttype=core&format=json

24 October 2019

PubMed publication ID

8078767

1 reference