Concerted simulations reveal how peroxidase compound III formation results in cellular oscillations (Q40251108)

18 September 2017

Concerted simulations reveal how peroxidase compound III formation results in cellular oscillations (English)

1 reference

18 September 2017

Lars F Olsen

3

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Rebecca C Wade

object named as

Rebecca C Wade

series ordinal

4

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author name string

Razif R Gabdoulline

series ordinal

1

1 reference

PMCID

1303318

18 September 2017

Ursula Kummer

series ordinal

2

1 reference

PMCID

1303318

18 September 2017

language of work or name

English

0 references

publication date

1 September 2003

1 reference

18 September 2017

1 reference

18 September 2017

85

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18 September 2017

3

1 reference

18 September 2017

1421-1428

1 reference

A model of the oscillatory metabolism of activated neutrophils

18 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303318

RETRACTED: Apparent role of traveling metabolic waves in oxidant release by living neutrophils

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303318

The catalytic pathway of horseradish peroxidase at high resolution

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303318

Mutations affecting the calcium-binding site of myeloperoxidase and lactoperoxidase

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303318

Complement deposition on immune complexes reduces the frequencies of metabolic, proteolytic, and superoxide oscillations of migrating neutrophils

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303318

Electrostatic steering and ionic tethering in enzyme-ligand binding: insights from simulations

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303318

Positioning hydrogen atoms by optimizing hydrogen-bond networks in protein structures

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303318

Novel dimeric interface and electrostatic recognition in bacterial Cu,Zn superoxide dismutase

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303318

Structure and mechanism of copper, zinc superoxide dismutase

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303318

Presence of endogenous calcium ion and its functional and structural regulation in horseradish peroxidase.

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303318

Brownian dynamics simulation of protein-protein diffusional encounter

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303318

Computer simulation of protein-protein association kinetics: acetylcholinesterase-fasciculin

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303318

Sustained oscillations in a lactoperoxidase. NADPH and O2 system.

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303318

Faster superoxide dismutase mutants designed by enhancing electrostatic guidance

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303318

pKa calculations for class A beta-lactamases: methodological and mechanistic implications

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303318

Oscillatory dynamics protect enzymes and possibly cells against toxic substances.

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303318

Melatonin activates the peroxidase-oxidase reaction and promotes oscillations.

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303318

Oscillations in the peroxidase-oxidase reaction: a comparison of different peroxidases.

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303318

The role of arginine 143 in the electrostatics and mechanism of Cu,Zn superoxide dismutase: computational and experimental evaluation by mutational analysis

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303318

Protein-protein association: investigation of factors influencing association rates by Brownian dynamics simulations

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303318

Toward the engineering of a super efficient enzyme

2 December 2018

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2803%2974574-3

The OPLS [optimized potentials for liquid simulations] potential functions for proteins, energy minimizations for crystals of cyclic peptides and crambin

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2803%2974574-3

A pulse radiolysis investigation of the reactions of myeloperoxidase with superoxide and hydrogen peroxide

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2803%2974574-3

Temperature dependence of the structure and dynamics of myoglobin. A simulation approach

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2803%2974574-3

The Peroxidaseminus signOxidase Oscillator and Its Constituent Chemistries

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2803%2974574-3

Point charge distributions and electrostatic steering in enzyme/substrate encounter: Brownian dynamics of modified copper/zinc superoxide dismutases

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2803%2974574-3

10.1016/S0006-3495(03)74574-3

7 January 2021

Identifiers

DOI

1 reference

18 September 2017

1 reference

18 September 2017

1 reference

PMCID

1303318