Deep sequencing and variant analysis of an Italian pathogenic field strain of equine infectious anaemia virus. (Q40289918)

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6 April 2020

title

Deep sequencing and variant analysis of an Italian pathogenic field strain of equine infectious anaemia virus (English)

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6 April 2020

9

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6 April 2020

author name string

K Cappelli

1

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6 April 2020

R F Cook

2

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6 April 2020

V Stefanetti

3

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6 April 2020

F Passamonti

4

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6 April 2020

G L Autorino

5

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6 April 2020

M T Scicluna

6

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6 April 2020

M Coletti

7

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6 April 2020

A Verini Supplizi

8

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publication date

15 March 2017

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Transboundary and Emerging Diseases

6 April 2020

published in

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6 April 2020

volume

64

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6 April 2020

page(s)

2104-2112

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issue

6

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Fidelity of DNA synthesis exhibited in vitro by the reverse transcriptase of the lentivirus equine infectious anemia virus

6 April 2020

cites work

1 reference

https://api.crossref.org/works/10.1111%2FTBED.12631

Detection, molecular characterization and phylogenetic analysis of full-length equine infectious anemia (EIAV) gag genes isolated from Shackleford Banks wild horses.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FTBED.12631

Geographic structuring of global EIAV isolates: a single origin for New World strains?

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FTBED.12631

Molecular detection, epidemiology, and genetic characterization of novel European field isolates of equine infectious anemia virus.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FTBED.12631

Equine infectious anemia and equine infectious anemia virus in 2013: a review

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FTBED.12631

EIAV envelope diversity: shaping viral persistence and encumbering vaccine efficacy

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FTBED.12631

Development of a nested PCR assay to detect equine infectious anemia proviral DNA from peripheral blood of naturally infected horses.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FTBED.12631

Identification of a novel equine infectious anemia virus field strain isolated from feral horses in southern Japan

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FTBED.12631

Comparative analysis of LTR and structural genes in an equine infectious anemia virus strain isolated from a feral horse in Japan

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FTBED.12631

Tissue sites of persistent infection and active replication of equine infectious anemia virus during acute disease and asymptomatic infection in experimentally infected equids

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FTBED.12631

Challenges and proposed solutions for more accurate serological diagnosis of equine infectious anaemia

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FTBED.12631

HIV-1 uses dynamic capsid pores to import nucleotides and fuel encapsidated DNA synthesis

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FTBED.12631

Geneious Basic: an integrated and extendable desktop software platform for the organization and analysis of sequence data

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FTBED.12631

Fast and accurate short read alignment with Burrows-Wheeler transform

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FTBED.12631

The Sequence Alignment/Map format and SAMtools

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FTBED.12631

Stampy: a statistical algorithm for sensitive and fast mapping of Illumina sequence reads

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FTBED.12631

Characterization of a cytolytic strain of equine infectious anemia virus

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FTBED.12631

Expression of functional protease and subviral particles by vaccinia virus containing equine infectious anaemia virus gag and 5' pol genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FTBED.12631

Presentation and binding affinity of equine infectious anemia virus CTL envelope and matrix protein epitopes by an expressed equine classical MHC class I molecule

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FTBED.12631

The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FTBED.12631

Epitope specificity is critical for high and moderate avidity cytotoxic T lymphocytes associated with control of viral load and clinical disease in horses with equine infectious anemia virus

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FTBED.12631

Early detection of dominant Env-specific and subdominant Gag-specific CD8+ lymphocytes in equine infectious anemia virus-infected horses using major histocompatibility complex class I/peptide tetrameric complexes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FTBED.12631

Real-time quantitative RT-PCR and PCR assays for a novel European field isolate of equine infectious anaemia virus based on sequence determination of the gag gene

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FTBED.12631

Genetic characterization by composite sequence analysis of a new pathogenic field strain of equine infectious anemia virus from the 2006 outbreak in Ireland

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FTBED.12631

Lentivirus genomic organization: the complete nucleotide sequence of the env gene region of equine infectious anemia virus

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FTBED.12631

Is a diagnostic system based exclusively on agar gel immunodiffusion adequate for controlling the spread of equine infectious anaemia?

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FTBED.12631

Equine infectious anemia virus gag and pol genes: relatedness to visna and AIDS virus

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FTBED.12631

Probabilistic inference of viral quasispecies subject to recombination

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FTBED.12631

Long terminal repeats are not the sole determinants of virulence for equine infectious anemia virus

21 January 2018

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https://api.crossref.org/works/10.1111%2FTBED.12631

ANNOVAR: functional annotation of genetic variants from high-throughput sequencing data

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FTBED.12631

Insertions, duplications and substitutions in restricted gp90 regions of equine infectious anaemia virus during febrile episodes in an experimentally infected horse

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FTBED.12631

Mutations occurring during serial passage of Japanese equine infectious anemia virus in primary horse macrophages

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FTBED.12631

21 January 2018

Identifiers

DOI

10.1111/TBED.12631

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28299895%20AND%20SRC:MED&resulttype=core&format=json

6 April 2020

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