Permeation properties of an engineered bacterial OmpF porin containing the EEEE-locus of Ca2+ channels (Q40303757)

19 September 2017

Permeation properties of an engineered bacterial OmpF porin containing the EEEE-locus of Ca2+ channels (English)

1 reference

19 September 2017

Henk Miedema

1

1 reference

19 September 2017

Anita Meter-Arkema

2

1 reference

19 September 2017

Jenny Wierenga

3

1 reference

19 September 2017

John Tang

4

1 reference

19 September 2017

Bob Eisenberg

5

1 reference

19 September 2017

Wolfgang Nonner

6

1 reference

19 September 2017

Hans Hektor

7

1 reference

19 September 2017

Dirk Gillespie

8

1 reference

19 September 2017

Wim Meijberg

9

1 reference

19 September 2017

language of work or name

English

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publication date

23 August 2004

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19 September 2017

11

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inferred from page(s)

published in

Biophysical Journal

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19 September 2017

87

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19 September 2017

5

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19 September 2017

3137-3147

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Ionization states of residues in OmpF and mutants: effects of dielectric constant and interactions between residues

19 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1304784

Residue ionization and ion transport through OmpF channels

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1304784

Multistep mechanism of chloride translocation in a strongly anion-selective porin channel

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1304784

Solute uptake through general porins

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1304784

Proteins, channels and crowded ions

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1304784

The structure of bacterial outer membrane proteins

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1304784

Imaging the electrostatic potential of transmembrane channels: atomic probe microscopy of OmpF porin

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1304784

A prokaryotic voltage-gated sodium channel

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1304784

Role of charged residues at the OmpF porin channel constriction probed by mutagenesis and simulation

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1304784

Binding and selectivity in L-type calcium channels: a mean spherical approximation.

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1304784

Ion channel selectivity using an electric stew

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1304784

Ion permeation and glutamate residues linked by Poisson-Nernst-Planck theory in L-type calcium channels

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1304784

A molecular dynamics study of the pores formed by Escherichia coli OmpF porin in a fully hydrated palmitoyloleoylphosphatidylcholine bilayer

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1304784

General and specific porins from bacterial outer membranes

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1304784

Anomalous mole fraction effect, electrostatics, and binding in ionic channels

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1304784

On the structural basis for size-selective permeation of organic cations through the voltage-gated sodium channel. Effect of alanine mutations at the DEKA locus on selectivity, inhibition by Ca2+ and H+, and molecular sieving

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1304784

On the structural basis for ionic selectivity among Na+, K+, and Ca2+ in the voltage-gated sodium channel

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1304784

Crystal structures explain functional properties of two E. coli porins

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1304784

Computing the field in proteins and channels

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1304784

The cation selectivity filter of the bacterial sodium channel, NaChBac

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1304784

Computational observation of an ion permeation through a channel protein

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1304784

Molecular determinants of Ca2+ selectivity and ion permeation in L-type Ca2+ channels

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1304784

Mechanism of ion permeation through calcium channels

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1304784

Non-selective conductance in calcium channels of frog muscle: calcium selectivity in a single-file pore

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1304784

Calcium channel characteristics conferred on the sodium channel by single mutations

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1304784

Molecular origin of the cation selectivity in OmpF porin: single channel conductances vs. free energy calculation

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1304784

Physical descriptions of experimental selectivity measurements in ion channels.

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1304784

Ion permeation and selectivity of OmpF porin: a theoretical study based on molecular dynamics, Brownian dynamics, and continuum electrodiffusion theory.

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1304784

Ions and counterions in a biological channel: a molecular dynamics simulation of OmpF porin from Escherichia coli in an explicit membrane with 1 M KCl aqueous salt solution

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1304784

Brownian dynamics simulation of ion flow through porin channels.

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1304784

Coupling site-directed mutagenesis with high-level expression: large scale production of mutant porins from E. coli

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1304784

Electrostatic properties of two porin channels from Escherichia coli

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1304784

Ion Selectivity Reversal and Induction of Voltage-Gating by Site-Directed Mutations in theParacoccus denitrificansPorin†

4 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1304784

Physiology. A one-domain voltage-gated sodium channel in bacteria

2 December 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/15326033

12 December 2020

inferred from PubMed ID database lookup

Density functional theory of charged, hard-sphere fluids

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/15326033

12 December 2020

inferred from PubMed ID database lookup

Structural and functional characterization of OmpF porin mutants selected for larger pore size. II. Functional characterization

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/15326033

12 December 2020

inferred from PubMed ID database lookup

Identifiers

DOI

10.1529/BIOPHYSJ.104.041384

1 reference

19 September 2017

1 reference

19 September 2017

PubMed publication ID

15326033

1 reference