Discontinuous movement and conformational change during pausing and termination by T7 RNA polymerase (Q40323705)

19 September 2017

Discontinuous movement and conformational change during pausing and termination by T7 RNA polymerase (English)

1 reference

19 September 2017

Srabani Mukherjee

1

1 reference

19 September 2017

Luis G Brieba

series ordinal

2

1 reference

19 September 2017

Rui Sousa

series ordinal

3

1 reference

19 September 2017

language of work or name

English

0 references

publication date

1 December 2003

1 reference

19 September 2017

1 reference

19 September 2017

22

1 reference

19 September 2017

6483-6493

1 reference

19 September 2017

24

1 reference

Structure of a T7 RNA polymerase elongation complex at 2.9 A resolution

19 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=291813

Structural basis for the transition from initiation to elongation transcription in T7 RNA polymerase

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=291813

T7 promoter release mediated by DNA scrunching

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=291813

The specificity loop of T7 RNA polymerase interacts first with the promoter and then with the elongating transcript, suggesting a mechanism for promoter clearance

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=291813

Structure of a transcribing T7 RNA polymerase initiation complex

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=291813

Structure of T7 RNA polymerase complexed to the transcriptional inhibitor T7 lysozyme

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=291813

Crystal structure of bacteriophage T7 RNA polymerase at 3.3 A resolution

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=291813

Intrinsic termination of T7 RNA polymerase mediated by either RNA or DNA.

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=291813

Characterization of an unusual, sequence-specific termination signal for T7 RNA polymerase

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=291813

Pausing and termination by bacteriophage T7 RNA polymerase.

15 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=291813

Interaction of T7 RNA polymerase with DNA in an elongation complex arrested at a specific psoralen adduct site.

15 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=291813

Transcription termination in vitro by bacteriophage T7 RNA polymerase. The role of sequence elements within and surrounding a rho-independent transcription terminator

15 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=291813

Parameters affecting transcription termination by Escherichia coli RNA polymerase. I. Analysis of 13 rho-independent terminators

15 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=291813

Scanning mutagenesis reveals roles for helix n of the bacteriophage T7 RNA polymerase thumb subdomain in transcription complex stability, pausing, and termination

15 June 2018

1 reference

https://api.crossref.org/works/10.1093%2FEMBOJ%2FCDG618

Synthesis of the protein cutting reagent iron (S)-1-(p-bromoacetamidobenzyl)ethylenediaminetetraacetate and conjugation to cysteine side chains

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FEMBOJ%2FCDG618

A mutant T7 RNA polymerase that is defective in RNA binding and blocked in the early stages of transcription

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FEMBOJ%2FCDG618

Misincorporation by wild-type and mutant T7 RNA polymerases: identification of interactions that reduce misincorporation rates by stabilizing the catalytically incompetent open conformation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FEMBOJ%2FCDG618

Mutant bacteriophage T7 RNA polymerases with altered termination properties

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FEMBOJ%2FCDG618

Use of site-specifically tethered chemical nucleases to study macromolecular reactions

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FEMBOJ%2FCDG618

Sequence-specific termination by T7 RNA polymerase requires formation of paused conformation prior to the point of RNA release

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FEMBOJ%2FCDG618

The thumb's knuckle. Flexibility in the thumb subdomain of T7 RNA polymerase is revealed by the structure of a chimeric T7/T3 RNA polymerase

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FEMBOJ%2FCDG618

Transcription termination by bacteriophage T7 RNA polymerase at rho-independent terminators.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=291813

Limited topological alteration of the T7 RNA polymerase active center at intrinsic termination sites

20 August 2018

1 reference

https://api.crossref.org/works/10.1093%2FEMBOJ%2FCDG618

Characterization of two types of termination signal for bacteriophage T7 RNA polymerase

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FEMBOJ%2FCDG618

Mechanism of inhibition of bacteriophage T7 RNA polymerase by T7 lysozyme

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FEMBOJ%2FCDG618

Structural transitions mediating transcription initiation by T7 RNA polymerase

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/14657021

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Determination of intrinsic transcription termination efficiency by RNA polymerase elongation rate

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/14657021

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1093/EMBOJ/CDG618

1 reference

19 September 2017

1 reference

19 September 2017

1 reference