Basal relationships in the Drosophila melanogaster species group (Q40344377)

19 September 2017

Basal relationships in the Drosophila melanogaster species group (English)

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19 September 2017

Drosophila melanogaster

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author name string

Artyom Kopp

series ordinal

1

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19 September 2017

9 March 2006

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Molecular Phylogenetics and Evolution

19 September 2017

1 reference

19 September 2017

39

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19 September 2017

3

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19 September 2017

787-798

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Bayes or bootstrap? A simulation study comparing the performance of Bayesian Markov chain Monte Carlo sampling and bootstrapping in assessing phylogenetic confidence

19 September 2017

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.01.029

Least and most powerful phylogenetic tests to elucidate the origin of the seed plants in the presence of conflicting signals under misspecified models

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.01.029

The utility of the incongruence length difference test.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.01.029

Molecular evolution in Drosophila and the higher Diptera II. A time scale for fly evolution

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.01.029

Current status of the Drosophila melanogaster species-group (Diptera)

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.01.029

Branch Support and Tree Stability

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.01.029

Model misspecification and probabilistic tests of topology: evidence from empirical data sets

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.01.029

Comparing bootstrap and posterior probability values in the four-taxon case

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.01.029

Can three incongruence tests predict when data should be combined?

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.01.029

Molecular characterization and evolution of the amylase multigene family of Drosophila ananassae.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.01.029

When does the incongruence length difference test fail?

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.01.029

Comparison of Bayesian and maximum likelihood bootstrap measures of phylogenetic reliability.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.01.029

Increased congruence does not necessarily indicate increased phylogenetic accuracy--the behavior of the incongruence length difference test in mixed-model analyses.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.01.029

Reliability of Bayesian Posterior Probabilities and Bootstrap Frequencies in Phylogenetics

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.01.029

Statistical tests of models of DNA substitution.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.01.029

Likelihood-based tests of topologies in phylogenetics

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.01.029

Chance caught on the wing: cis-regulatory evolution and the origin of pigment patterns in Drosophila

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.01.029

Phylogenetic utility of mitochondrial COI and nuclear Gpdh genes in Drosophila

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.01.029

Concerted evolution of duplicated protein-coding genes in Drosophila

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.01.029

An Empirical Test of Bootstrapping as a Method for Assessing Confidence in Phylogenetic Analysis

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.01.029

Congruence Versus Phylogenetic Accuracy: Revisiting the Incongruence Length Difference Test

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.01.029

Bootstrapping Phylogenetic Trees: Theory and Methods

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.01.029

Combining data in phylogenetic analysis.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.01.029

Frequentist properties of Bayesian posterior probabilities of phylogenetic trees under simple and complex substitution models

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.01.029

MRBAYES: Bayesian inference of phylogenetic trees

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.01.029

Molecular evolution of the Amy multigenes in the subgenus Sophophora of Drosophila.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.01.029

Evolution of nucleotide substitutions and gene regulation in the amylase multigenes in Drosophila kikkawai and its sibling species.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.01.029

Macroevolutionary relationships of species of Drosophila melanogaster group based on mtDNA sequences

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.01.029

Phylogenetic position of the subgenus Lordiphosa of the genus Drosophila (Diptera: Drosophilidae) inferred from alcohol dehydrogenase (Adh) gene sequences.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.01.029

Evaluation of the maximum likelihood estimate of the evolutionary tree topologies from DNA sequence data, and the branching order in hominoidea

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.01.029

Genetic control and evolution of sexually dimorphic characters in Drosophila

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.01.029

Evolution of male sexual characters in the oriental Drosophila melanogaster species group.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.01.029

Phylogeny of the Oriental Drosophila melanogaster species group: a multilocus reconstruction

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.01.029

Partitioned likelihood support and the evaluation of data set conflict

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.01.029

The importance of proper model assumption in bayesian phylogenetics.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.01.029

Polytomies and Bayesian phylogenetic inference

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.01.029

The phylogeny of the subgroups within the melanogaster species group: likelihood tests on COI and COII sequences and a Bayesian estimate of phylogeny

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.01.029

Evolution of the amylase isozymes in the Drosophila melanogaster species subgroup.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.01.029

Bayesian phylogenetic analysis of combined data

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.01.029

Phylogeny of the subgenus sophophora (Diptera: drosophilidae) based on combined analysis of nuclear and mitochondrial sequences

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.01.029

Molecular phylogeny of the subgenus Sophophora of Drosophila derived from large subunit of ribosomal RNA sequences

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.01.029

The evolutionary history of the amylase multigene family in Drosophila pseudoobscura.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.01.029

MODELTEST: testing the model of DNA substitution

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.01.029

Combining multiple data sets in a likelihood analysis: which models are the best?

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.01.029

Multiple Comparisons of Log-Likelihoods with Applications to Phylogenetic Inference

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.01.029

Divergence of larval morphology between Drosophila sechellia and its sibling species caused by cis-regulatory evolution of ovo/shaven-baby

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.01.029

Overcredibility of molecular phylogenies obtained by Bayesian phylogenetics

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.01.029

Bias in phylogenetic estimation and its relevance to the choice between parsimony and likelihood methods

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.01.029

Phylogenetic Inference from Restriction Endonuclease Cleavage Site Maps with Particular Reference to the Evolution of Humans and the Apes

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.01.029

CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.01.029

Phylogenetic relationships of Drosophila melanogaster species group deduced from spacer regions of histone gene H2A-H2B.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.01.029

Maximum-Likelihood Models for Combined Analyses of Multiple Sequence Data

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.01.029

Failure of the ILD to determine data combinability for slow loris phylogeny

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.01.029

Phylogeny and the evolution of the Amylase multigenes in the Drosophila montium species subgroup

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.01.029

Evolutionary history and mode of the amylase multigene family in Drosophila.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.01.029

Statistical properties of bootstrap estimation of phylogenetic variability from nucleotide sequences: II. Four taxa without a molecular clock

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.01.029

10.1016/J.YMPEV.2006.01.029

7 January 2021

Identifiers

DOI

1 reference

19 September 2017

1 reference

PubMed ID

16527496