BloodSpot: a database of gene expression profiles and transcriptional programs for healthy and malignant haematopoiesis (Q40386032)

20 September 2017

BloodSpot: a database of gene expression profiles and transcriptional programs for healthy and malignant haematopoiesis (English)

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20 September 2017

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8

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20 September 2017

9

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20 September 2017

7

Ole Winther

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Casper Kaae Sønderby

6

object named as

Casper Kaae Sønderby

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Sachin Pundhir

object named as

Sachin Pundhir

5

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Frederik Otzen Bagger

object named as

Frederik Otzen Bagger

1

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author name string

Damir Sasivarevic

2

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PMCID

4702803

20 September 2017

Sina Hadi Sohi

3

1 reference

PMCID

4702803

20 September 2017

Linea Gøricke Laursen

4

1 reference

20 September 2017

26 October 2015

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20 September 2017

Nucleic Acids Research

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20 September 2017

44

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20 September 2017

D1

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20 September 2017

D917-24

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Creative Commons Attribution-NonCommercial 4.0 International

20 September 2017

start time

15 November 2016

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

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cites work

Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2

1 reference

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CODEX: a next-generation sequencing experiment database for the haematopoietic and embryonic stem cell communities.

22 September 2017

1 reference

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Immunogenetics. Chromatin state dynamics during blood formation

22 September 2017

1 reference

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BloodChIP: a database of comparative genome-wide transcription factor binding profiles in human blood cells

22 September 2017

1 reference

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Genomic and epigenomic landscapes of adult de novo acute myeloid leukemia

22 September 2017

1 reference

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TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions

22 September 2017

1 reference

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Gene Expression Commons: an open platform for absolute gene expression profiling

22 September 2017

1 reference

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Deciphering the transcriptional network of the dendritic cell lineage

22 September 2017

1 reference

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Intrathymic programming of effector fates in three molecularly distinct γδ T cell subtypes

22 September 2017

1 reference

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Transcriptional profiling of stroma from inflamed and resting lymph nodes defines immunological hallmarks

22 September 2017

1 reference

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CCAAT/enhancer binding protein alpha (C/EBP(alpha))-induced transdifferentiation of pre-B cells into macrophages involves no overt retrodifferentiation.

22 September 2017

1 reference

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CD103+ pulmonary dendritic cells preferentially acquire and present apoptotic cell-associated antigen

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702803

Transcriptomes of the B and T lineages compared by multiplatform microarray profiling

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702803

Gene expression signatures in childhood acute leukemias are largely unique and distinct from those of normal tissues and other malignancies.

22 September 2017

1 reference

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A HaemAtlas: characterizing gene expression in differentiated human blood cells

22 September 2017

1 reference

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Dysregulated gene expression networks in human acute myelogenous leukemia stem cells

22 September 2017

1 reference

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BloodExpress: a database of gene expression in mouse haematopoiesis

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702803

Integrated regulation of Toll-like receptor responses by Notch and interferon-gamma pathways

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702803

Prediction of molecular subtypes in acute myeloid leukemia based on gene expression profiling

22 September 2017

1 reference

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Systemic increase in type I interferon activity in Sjögren's syndrome: a putative role for plasmacytoid dendritic cells

22 September 2017

1 reference

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An international standardization programme towards the application of gene expression profiling in routine leukaemia diagnostics: the Microarray Innovations in LEukemia study prephase.

22 September 2017

1 reference

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Hematopoietic fingerprints: an expression database of stem cells and their progeny

22 September 2017

1 reference

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Hox genes in hematopoiesis and leukemogenesis.

22 September 2017

1 reference

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Linear models and empirical bayes methods for assessing differential expression in microarray experiments

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702803

Adjusting batch effects in microarray expression data using empirical Bayes methods

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702803

Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702803

affy--analysis of Affymetrix GeneChip data at the probe level

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702803

TGIF1 is a negative regulator of MLL-rearranged acute myeloid leukemia

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702803

HemaExplorer: a database of mRNA expression profiles in normal and malignant haematopoiesis

17 June 2018

1 reference

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Densely interconnected transcriptional circuits control cell states in human hematopoiesis

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702803

Comparing cancer vs normal gene expression profiles identifies new disease entities and common transcriptional programs in AML patients.

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702803

High VEGFC expression is associated with unique gene expression profiles and predicts adverse prognosis in pediatric and adult acute myeloid leukemia.

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702803

Gene expression profiling in AML with normal karyotype can predict mutations for molecular markers and allows novel insights into perturbed biological pathways.

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702803

Clinical utility of microarray-based gene expression profiling in the diagnosis and subclassification of leukemia: report from the International Microarray Innovations in Leukemia Study Group

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702803

20 August 2018

Identifiers

DOI

10.1093/NAR/GKV1101

1 reference

journals/nar/BaggerSSLPSWRP16

20 September 2017

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

20 September 2017

1 reference

PMCID

4702803