Structure of open promoter complexes with Escherichia coli RNA polymerase as revealed by the DNase I footprinting technique: compilation analysis (Q40396678)

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scientific article published on November 1995

Language	Label	Description	Also known as
English	Structure of open promoter complexes with Escherichia coli RNA polymerase as revealed by the DNase I footprinting technique: compilation analysis	scientific article published on November 1995

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scholarly article

1 reference

Europe PubMed Central

PMC publication ID

20 September 2017

Structure of open promoter complexes with Escherichia coli RNA polymerase as revealed by the DNase I footprinting technique: compilation analysis (English)

1 reference

Europe PubMed Central

PMC publication ID

20 September 2017

1 reference

based on heuristic

inferred from title

Escherichia coli

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based on heuristic

inferred from title

author name string

Ozoline ON

1

1 reference

Europe PubMed Central

PMC publication ID

20 September 2017

Tsyganov MA

2

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Europe PubMed Central

PMC publication ID

20 September 2017

language of work or name

1 reference

based on heuristic

inferred from title

publication date

1 November 1995

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Europe PubMed Central

PMC publication ID

20 September 2017

Nucleic Acids Research

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Europe PubMed Central

PMC publication ID

20 September 2017

23

1 reference

Europe PubMed Central

PMC publication ID

20 September 2017

22

1 reference

Europe PubMed Central

PMC publication ID

20 September 2017

4533-4541

1 reference

Europe PubMed Central

PMC publication ID

20 September 2017

Compilation of E. coli mRNA promoter sequences

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=307422

22 September 2017

E. coli RNA polymerase, deleted in the C-terminal part of its alpha-subunit, interacts differently with the cAMP-CRP complex at the lacP1 and at the galP1 promoter

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=307422

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A third recognition element in bacterial promoters: DNA binding by the alpha subunit of RNA polymerase

1 reference

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22 September 2017

Interactions between the cyclic AMP receptor protein and the alpha subunit of RNA polymerase at the Escherichia coli galactose operon P1 promoter

1 reference

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Multiple protein-DNA and protein-protein interactions are involved in transcriptional activation by MalT.

1 reference

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22 September 2017

Compilation and analysis ofEscherichia colipromoter DNA sequences

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=307422

22 September 2017

Interactions of RNA polymerase and the cyclic AMP receptor protein on DNA of theE. coligalactose operon

1 reference

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The coupled use of ‘footprinting’ and exonuclease III methodology for RNA polymerase binding and initiation. Application for the analysis of three tandem promoters at the control region of colicin EI

1 reference

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Characterization of the β-lactamase promoter of pBR322

1 reference

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Mechanism of araC autoregulation and the domains of two overlapping promoters, Pc and PBAD, in the L-arabinose regulatory region of Escherichia coli

1 reference

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Deoxyribonucleic acid sequence of araBAD promoter mutants of Escherichia coli

1 reference

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Interaction between E. coli RNA polymerase and the tetR promoter from pSC101: homologies and differences with other E. coli promoter systems from close contact point studies

1 reference

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The pathway of E. coli RNA polymerase-promoter complex formation as visualized by footprinting.

1 reference

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22 September 2017

Analysis of E. coli promoter sequences

1 reference

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Structure refined to 2Å of a nicked DNA octanucleotide complex with DNase I

1 reference

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22 September 2017

Structure and function of E. coli promoter DNA.

1 reference

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22 September 2017

Visualization and quantitative analysis of complex formation between E. coli RNA polymerase and an rRNA promoter in vitro

1 reference

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Photocleavage of DNA and photofootprinting of E. coli RNA polymerase bound to promoter DNA by azido-9-acridinylamines

1 reference

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Characterization of a third, cII-dependent, coordinately activated promoter on phage lambda involved in lysogenic development.

1 reference

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22 September 2017

Cooperative DNA binding of heterologous proteins: evidence for contact between the cyclic AMP receptor protein and RNA polymerase

1 reference

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A mutant Escherichia coli sigma 70 subunit of RNA polymerase with altered promoter specificity

1 reference

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How Escherichia coli RNA polymerase can negatively regulate transcription from a constitutive promoter

1 reference

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Promoter selectivity of Escherichia coli RNA polymerase: effect of base substitutions in the promoter -35 region on promoter strength

1 reference

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Mutations that alter the ability of the Escherichia coli cyclic AMP receptor protein to activate transcription.

1 reference

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E. coli promoter spacer regions contain nonrandom sequences which correlate to spacer length

1 reference

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Kinetic studies of the modulation of ada promoter activity by upstream elements

1 reference

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Identification of the promoter, operator, and 5' and 3' ends of the mRNA of the Escherichia coli K-12 gene aroG.

1 reference

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DNase I-induced DNA conformation. 2 A structure of a DNase I-octamer complex

1 reference

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The interaction of RNA polymerase and lac repressor with the lac control region

1 reference

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Promoter recognition and promoter strength in the Escherichia coli system

1 reference

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Effects of a single base-pair deletion in the bacteriophage lambda PRM promoter. Repression of PRM by repressor bound at OR2 and by RNA polymerase bound at PR.

1 reference

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The Escherichia coli cysG promoter belongs to the 'extended -10' class of bacterial promoters

1 reference

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RNA polymerase interactions with the upstream region of the E. coli tyrT promoter

1 reference

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Changes in the DNA structure of the lac UV5 promoter during formation of an open complex with Escherichia coli RNA polymerase

1 reference

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Promoters of Escherichia coli: a hierarchy of in vivo strength indicates alternate structures.

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Topological unwinding of strong and weak promoters by RNA polymerase. A comparison between the lac wild-type and the UV5 sites of Escherichia coli

1 reference

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The 0 degree C closed complexes between Escherichia coli RNA polymerase and two promoters, T7-A3 and lacUV5.

1 reference

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Effect of polyadenine-containing curved DNA on promoter utilization in Bacillus subtilis

1 reference

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Promoter recognition by Escherichia coli RNA polymerase: effects of base substitutions in the -10 and -35 regions

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The MerR heavy metal receptor mediates positive activation in a topologically novel transcription complex.

1 reference

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Intermediates in the formation of the open complex by RNA polymerase holoenzyme containing the sigma factor sigma 32 at the groE promoter.

1 reference

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Recognition of nucleotide sequences at the Escherichia coli galactose operon P1 promoter by RNA polymerase

1 reference

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Synergy between Escherichia coli CAP protein and RNA polymerase in the lac promoter open complex.

1 reference

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Escherichia coli promoters. II. A spacing class-dependent promoter search protocol

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A stressed intermediate in the formation of stably initiated RNA chains at the Escherichia coli lac UV5 promoter.

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Development of RNA polymerase-promoter contacts during open complex formation

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1 reference

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Constitutive function of a positively regulated promoter reveals new sequences essential for activity

1 reference

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Studies with theEscherichia coligalactose operon regulatory region carrying a point mutation that simultaneously inactivates the two overlapping promoters Interactions with RNA polymerase and the cyclic AMP receptor protein

1 reference

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Escherichia coli promoters. I. Consensus as it relates to spacing class, specificity, repeat substructure, and three-dimensional organization

1 reference

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Binding of RNA polymerase and the catabolite gene activator protein within the cat promoter in Escherichia coli

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Autoregulation of the Escherichia coli crp gene: CRP is a transcriptional repressor for its own gene

1 reference

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inferred from PubMed ID database lookup

Bacteriophage λ protein cII binds promoters on the opposite face of the DNA helix from RNA polymerase

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https://pubmed.ncbi.nlm.nih.gov/8524639

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based on heuristic

inferred from PubMed ID database lookup

DNA structural variations in the E. coli tyrT promoter

1 reference

https://pubmed.ncbi.nlm.nih.gov/8524639

12 December 2020

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inferred from PubMed ID database lookup

DNA determinants of rRNA synthesis in E. coli: growth rate dependent regulation, feedback inhibition, upstream activation, antitermination

1 reference

https://pubmed.ncbi.nlm.nih.gov/8524639

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based on heuristic

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Altered promoter recognition by mutant forms of the sigma 70 subunit of Escherichia coli RNA polymerase

1 reference

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based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1093/NAR/23.22.4533

1 reference

Europe PubMed Central

PMC publication ID

20 September 2017

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

20 September 2017

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

20 September 2017

ResearchGate publication ID

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