Stage-specific assembly events of the 6-MDa small-subunit processome initiate eukaryotic ribosome biogenesis. (Q40417826)

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27 February 2020

title

Stage-specific assembly events of the 6-MDa small-subunit processome initiate eukaryotic ribosome biogenesis (English)

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27 February 2020

2

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27 February 2020

Jonas Barandun

series ordinal

3

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27 February 2020

Brian D. Dill

series ordinal

4

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27 February 2020

Sebastian Klinge

series ordinal

5

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27 February 2020

1

Malik Chaker-Margot

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27 February 2020

publication date

19 October 2015

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Nature Structural & Molecular Biology

27 February 2020

published in

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27 February 2020

volume

22

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27 February 2020

issue

11

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27 February 2020

page(s)

920-923

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Ribosome biogenesis in the yeast Saccharomyces cerevisiae

27 February 2020

cites work

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A large nucleolar U3 ribonucleoprotein required for 18S ribosomal RNA biogenesis

31 March 2020

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Pre-18S ribosomal RNA is structurally compacted into the SSU processome prior to being cleaved from nascent transcripts in Saccharomyces cerevisiae

31 March 2020

1 reference

The small subunit processome in ribosome biogenesis—progress and prospects

31 March 2020

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Cotranscriptional events in eukaryotic ribosome synthesis

31 March 2020

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90S pre-ribosomes include the 35S pre-rRNA, the U3 snoRNP, and 40S subunit processing factors but predominantly lack 60S synthesis factors

31 March 2020

1 reference

The 90S preribosome is a multimodular structure that is assembled through a hierarchical mechanism.

31 March 2020

1 reference

A second base pair interaction between U3 small nucleolar RNA and the 5'-ETS region is required for early cleavage of the yeast pre-ribosomal RNA.

31 March 2020

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Cross-linking, ligation, and sequencing of hybrids reveals RNA-RNA interactions in yeast

31 March 2020

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The initial U3 snoRNA:pre-rRNA base pairing interaction required for pre-18S rRNA folding revealed by in vivo chemical probing

31 March 2020

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Identification of protein binding sites on U3 snoRNA and pre-rRNA by UV cross-linking and high-throughput analysis of cDNAs

31 March 2020

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Cracking pre-40S ribosomal subunit structure by systematic analyses of RNA-protein cross-linking

31 March 2020

1 reference

An RNA-Binding Complex Involved in Ribosome Biogenesis Contains a Protein with Homology to tRNA CCA-Adding Enzyme

31 March 2020

1 reference

Rio1 mediates ATP-dependent final maturation of 40S ribosomal subunits

31 March 2020

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Multiple in vivo pathways for Escherichia coli small ribosomal subunit assembly occur on one pre-rRNA

31 March 2020

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Synthesis of large rRNAs by RNA polymerase II in mutants of Saccharomyces cerevisiae defective in RNA polymerase I

31 March 2020

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Modulation of protein properties in living cells using nanobodies

31 March 2020

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Rrp47 and the function of the Sas10/C1D domain

31 March 2020

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The exosome-binding factors Rrp6 and Rrp47 form a composite surface for recruiting the Mtr4 helicase

31 March 2020

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I-DIRT, a general method for distinguishing between specific and nonspecific protein interactions

31 March 2020

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Nucleolar proteins Bfr2 and Enp2 interact with DEAD-box RNA helicase Dbp4 in two different complexes

31 March 2020

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The nucleolar protein Esf2 interacts directly with the DExD/H box RNA helicase, Dbp8, to stimulate ATP hydrolysis

31 March 2020

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Synthetic lethal interactions with conditional poly(A) polymerase alleles identify LCP5, a gene involved in 18S rRNA maturation

31 March 2020

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Rrp5 binding at multiple sites coordinates pre-rRNA processing and assembly

31 March 2020

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Multiple RNA interactions position Mrd1 at the site of the small subunit pseudoknot within the 90S pre-ribosome

31 March 2020

1 reference

Nop9 is an RNA binding protein present in pre-40S ribosomes and required for 18S rRNA synthesis in yeast

31 March 2020

1 reference

The DEAH-box helicase Dhr1 dissociates U3 from the pre-rRNA to promote formation of the central pseudoknot.

31 March 2020

1 reference

ATPase-dependent role of the atypical kinase Rio2 on the evolving pre-40S ribosomal subunit

31 March 2020

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Mutants of the bacteriophage MS2 coat protein that alter its cooperative binding to RNA.

31 March 2020

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A robust pipeline for rapid production of versatile nanobody repertoires

31 March 2020

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One-step purification of recombinant proteins using a nanomolar-affinity streptavidin-binding peptide, the SBP-Tag

31 March 2020

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Stop and go extraction tips for matrix-assisted laser desorption/ionization, nanoelectrospray, and LC/MS sample pretreatment in proteomics

31 March 2020

1 reference

MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification

31 March 2020

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Global quantification of mammalian gene expression control

31 March 2020

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Mutations in eukaryotic 18S ribosomal RNA affect translational fidelity and resistance to aminoglycoside antibiotics

31 March 2020

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/26479197

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1038/NSMB.3111

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27 February 2020

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