Direct monitoring of allosteric recognition of type IIE restriction endonuclease EcoRII. (Q40421023)

20 September 2017

Direct monitoring of allosteric recognition of type IIE restriction endonuclease EcoRII. (English)

1 reference

20 September 2017

Shuntaro Takahashi

1

1 reference

20 September 2017

Hisao Matsuno

series ordinal

2

1 reference

20 September 2017

Hiroyuki Furusawa

series ordinal

3

1 reference

20 September 2017

Yoshio Okahata

series ordinal

4

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20 September 2017

language of work or name

English

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publication date

26 March 2008

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Journal of Biological Chemistry

20 September 2017

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20 September 2017

283

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20 September 2017

22

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20 September 2017

15023-15030

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Type II restriction endonucleases: structure and mechanism

20 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3258892

Crystal structure of type IIE restriction endonuclease EcoRII reveals an autoinhibition mechanism by a novel effector-binding fold

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3258892

Diversity of type II restriction endonucleases that require two DNA recognition sites

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3258892

PspGI, a type II restriction endonuclease from the extreme thermophile Pyrococcus sp.: structural and functional studies to investigate an evolutionary relationship with several mesophilic restriction enzymes

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3258892

A DNA methyltransferase can protect the genome from postdisturbance attack by a restriction-modification gene complex.

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3258892

EcoRII: a restriction enzyme evolving recombination functions?

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3258892

Structure and function of type II restriction endonucleases

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3258892

Design and characterization of asparagine- and lysine-containing alanine-based helical peptides that bind selectively to A.T base pairs of oligonucleotides immobilized on a 27 mhz quartz crystal microbalance

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3258892

Structure of the tetrameric restriction endonuclease NgoMIV in complex with cleaved DNA

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3258892

Imaging DNA loops induced by restriction endonuclease EcoRII. A single amino acid substitution uncouples target recognition from cooperative DNA interaction and cleavage

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3258892

Asymmetric DNA bending in the Cre-loxP site-specific recombination synapse

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3258892

Regions of endonuclease EcoRII involved in DNA target recognition identified by membrane-bound peptide repertoires.

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3258892

Structural changes in hemoglobin during adsorption to solid surfaces: effects of pH, ionic strength, and ligand binding

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3258892

Structure of the Holliday junction intermediate in Cre-loxP site-specific recombination.

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3258892

The biochemical basis of an all-or-none cell fate switch in Xenopus oocytes

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3258892

Structure of Cre recombinase complexed with DNA in a site-specific recombination synapse

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3258892

Recognition and cleavage of DNA by type-II restriction endonucleases

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3258892

Crystal structure of Citrobacter freundii restriction endonuclease Cfr10I at 2.15 A resolution

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3258892

The significance of distance and orientation of restriction endonuclease recognition sites in viral DNA genomes.

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3258892

EcoRII can be activated to cleave refractory DNA recognition sites

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3258892

QCM Operation in Liquids: Constant Sensitivity during Formation of Extended Protein Multilayers by Affinity.

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3258892

Kinetic analyses of divalent cation-dependent EcoRV digestions on a DNA-immobilized quartz crystal microbalance.

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3258892

Hydration and energy dissipation measurements of biomolecules on a piezoelectric quartz oscillator by admittance analyses.

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3258892

Kinetic studies of AMP-dependent phosphorolysis of amylopectin catalyzed by phosphorylase b on a 27 MHz quartz-crystal microbalance

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3258892

Direct monitoring of enzymatic glucan hydrolysis on a 27-MHz quartz-crystal microbalance.

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3258892

Characterization of DNA immobilization and subsequent hybridization on a 2D arrangement of streptavidin on a biotin-modified lipid bilayer supported on SiO2.

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3258892

The influence of cross-linking on protein-protein interactions in a marine adhesive: the case of two byssus plaque proteins from the blue mussel

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3258892

Cooperative binding properties of restriction endonuclease EcoRII with DNA recognition sites.

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3258892

Verwendung von Schwingquarzen zur Wägung dünner Schichten und zur Mikrowägung

20 August 2018

1 reference

Crossref

https://api.crossref.org/works/10.1074%2FJBC.M800334200

Polyacrylamide Adsorption from Aqueous Solutions on Gold and Silver Surfaces Monitored by the Quartz Crystal Microbalance

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1074%2FJBC.M800334200

The Cfr10I restriction enzyme is functional as a tetramer

21 January 2018

1 reference

12 December 2020

EcoRII endonuclease has two identical DNA-binding sites and cleaves one of two co-ordinated recognition sites in one catalytic event

1 reference

12 December 2020

Evolution of sequence recognition by restriction-modification enzymes: selective pressure for specificity decrease

1 reference

12 December 2020

1 reference

12 December 2020

Isolation, purification and properties of restriction endonuclease EcoRII

1 reference

12 December 2020

Identifiers

DOI

10.1074/JBC.M800334200

1 reference

20 September 2017

1 reference

20 September 2017

1 reference