How are tRNAs and mRNA arranged in the ribosome? An attempt to correlate the stereochemistry of the tRNA-mRNA interaction with constraints imposed by the ribosomal topography. (Q40547686)

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scientific article published on June 1992

Language	Label	Description	Also known as
English	How are tRNAs and mRNA arranged in the ribosome? An attempt to correlate the stereochemistry of the tRNA-mRNA interaction with constraints imposed by the ribosomal topography.	scientific article published on June 1992

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scholarly article

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22 September 2019

How are tRNAs and mRNA arranged in the ribosome? An attempt to correlate the stereochemistry of the tRNA-mRNA interaction with constraints imposed by the ribosomal topography (English)

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22 September 2019

Česlovas Venclovas

2

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22 September 2019

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V Lim

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22 September 2019

A Spirin

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22 September 2019

R Brimacombe

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22 September 2019

P Mitchell

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F Müller

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22 September 2019

publication date

1 June 1992

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22 September 2019

Nucleic Acids Research

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22 September 2019

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22 September 2019

11

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22 September 2019

2627-2637

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22 September 2019

Aminoacyl RNA domain of turnip yellow mosaic virus Val-RNA interacting with elongation factor Tu

1 reference

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22 September 2017

THE SYNTHESIS OF PROTEINS UPON RIBOSOMES

1 reference

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22 September 2017

Three tRNA binding sites on Escherichia coli ribosomes

1 reference

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22 September 2017

Covalent crosslinking of tRNA1Val to 16S RNA at the ribosomal P site: identification of crosslinked residues

1 reference

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22 September 2017

Nascent polypeptide chains emerge from the exit domain of the large ribosomal subunit: immune mapping of the nascent chain

1 reference

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22 September 2017

Immunoelectron microscopy of ribosomes

1 reference

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22 September 2017

Identification of a site on 23S ribosomal RNA located at the peptidyl transferase center

1 reference

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22 September 2017

Structure of yeast phenylalanine tRNA at 3 Å resolution

1 reference

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22 September 2017

Three-Dimensional Tertiary Structure of Yeast Phenylalanine Transfer RNA

1 reference

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22 September 2017

Morphology of the ribosomal 30S subparticle according to electron microscopic data

1 reference

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22 September 2017

Ribosomal translocation: facts and models

1 reference

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22 September 2017

Characteristic views of E. coli and B. stearothermophilus 30S ribosomal subunits in the electron microscope

1 reference

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22 September 2017

Ser-tRNAs from bovine mitochondrion form ternary complexes with bacterial elongation factor Tu and GTP.

1 reference

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22 September 2017

Studying ribosome structure by electron microscopy and computer-image processing

1 reference

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22 September 2017

The importance of highly conserved nucleotides in the binding region of chloramphenicol at the peptidyl transfer centre of Escherichia coli 23S ribosomal RNA.

1 reference

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22 September 2017

Posttranscriptional regulatory mechanisms in Escherichia coli

1 reference

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22 September 2017

Site-directed cross-linking of mRNA analogues to the Escherichia coli ribosome; identification of 30S ribosomal components that can be cross-linked to the mRNA at various points 5' with respect to the decoding site

1 reference

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22 September 2017

Ribosomal proteins S7 and L1 are located close to the decoding site of E. coli ribosome--affinity labeling studies with modified tRNAs carrying photoreactive probes attached adjacent to the 3'-end of the anticodon

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=336901

22 September 2017

Labeling the peptidyltransferase center of the Escherichia coli ribosome with photoreactive tRNA(Phe) derivatives containing azidoadenosine at the 3' end of the acceptor arm: a model of the tRNA-ribosome complex

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=336901

22 September 2017

Three-dimensional reconstruction of the ribosome from Escherichia coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=336901

22 September 2017

tRNA-tRNA interactions within cellular ribosomes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=336901

22 September 2017

Structure of E. coli glutaminyl-tRNA synthetase complexed with tRNA(Gln) and ATP at 2.8 A resolution

1 reference

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22 September 2017

Interaction of elongation factors EF-G and EF-Tu with a conserved loop in 23S RNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=336901

22 September 2017

A detailed model of the three-dimensional structure of Escherichia coli 16 S ribosomal RNA in situ in the 30 S subunit

1 reference

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22 September 2017

The role of modified purine 64 in initiator/elongator discrimination of tRNA(iMet) from yeast and wheat germ

1 reference

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22 September 2017

Class II aminoacyl transfer RNA synthetases: crystal structure of yeast aspartyl-tRNA synthetase complexed with tRNA(Asp)

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=336901

22 September 2017

Sites of interaction of the CCA end of peptidyl-tRNA with 23S rRNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=336901

22 September 2017

Three-dimensional reconstruction of the 70S Escherichia coli ribosome in ice: the distribution of ribosomal RNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=336901

22 September 2017

How does the mRNA pass through the ribosome?

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=336901

22 September 2017

A consonant model of the tRNA-ribosome complex during the elongation cycle of translation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=336901

22 September 2017

The three-dimensional folding of ribosomal RNA; localization of a series of intra-RNA cross-links in 23S RNA induced by treatment ofEscherichia coli50S ribosomal subunits withbis-(2-chloroethyl)-methylamine

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=336901

22 September 2017

Direct tRNA-protein interactions in ribosomal complexes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=336901

22 September 2017

Neighbourhood of the central fold of the tRNA molecule bound to theE.coliribosome—affinity labeling studies with modified tRNAs carrying photoreactive probes attached to the dihydrouridine loop

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=336901

22 September 2017

Selective isolation and detailed analysis of intra-RNA cross-links induced in the large ribosomal subunit of E. coli: a model for the tertiary structure of the tRNA binding domain in 23S RNA

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=336901

22 September 2017

Architecture of the Escherichia coli ribosome as determined by immune electron microscopy

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=336901

22 September 2017

The binding site of protein L1 on 23-S ribosomal RNA from Escherichia coli. 3. Nucleotide sequence

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=336901

22 September 2017

Regions of tRNA important for binding to the ribosomal A and P sites

1 reference

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22 September 2017

Aminoacyl-tRNA binding at the recognition site is the first step of the elongation cycle of protein synthesis

1 reference

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22 September 2017

Codon-anticodon interaction at the ribosomal P (peptidyl-tRNA) site

1 reference

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22 September 2017

Elongation factor G-dependent binding of a photoreactive GTP analogue to Escherichia coli ribosomes results in labeling of protein L11

1 reference

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25 September 2017

The path of mRNA through the Escherichia coli ribosome; site-directed cross-linking of mRNA analogues carrying a photo-reactive label at various points 3' to the decoding site.

1 reference

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25 September 2017

The location of mRNA in the ribosomal 30S initiation complex; site-directed cross-linking of mRNA analogues carrying several photo-reactive labels simultaneously on either side of the AUG start codon

1 reference

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25 September 2017

Photo-affinity labelling at the peptidyl transferase centre reveals two different positions for the A- and P-sites in domain V of 23S rRNA

1 reference

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25 September 2017

A model for the spatial arrangement of the proteins in the large subunit of the Escherichia coli ribosome.

1 reference

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25 September 2017

Localization of 5' and 3' ends of the ribosome-bound segment of template polynucleotides by immune electron microscopy

1 reference

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25 September 2017

The site of interaction of aminoacyl-tRNA with elongation factor Tu

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=336901

25 September 2017

Location of tRNA on the ribosome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=336901

17 June 2018

Formation and properties of a covalent complex between elongation factor Tu and Phe-tRNA bearing a photoaffinity probe on its 3-(3-amino-3-carboxypropyl)uridine residue

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=336901

17 June 2018

Partial resistance of nascent polypeptide chains to proteolytic digestion due to ribosomal shielding

1 reference

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17 June 2018

Localization of sites of photoaffinity labeling of the large subunit of Escherichia coli ribosomes by arylazide derivative of puromycin.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=336901

17 June 2018

Positions of S2, S13, S16, S17, S19 and S21 in the 30 S ribosomal subunit of Escherichia coli.

1 reference

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17 June 2018

Does the channel for nascent peptide exist inside the ribosome? Immune electron microscopy study

1 reference

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17 June 2018

Evidence that the G2661 region of 23S rRNA is located at the ribosomal binding sites of both elongation factors.

1 reference

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17 June 2018

Messenger RNA orientation on the ribosome. Placement by electron microscopy of antibody-complementary oligodeoxynucleotide complexes

1 reference

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17 June 2018

Binding of tRNA to the ribosomal A and P sites protects two distinct sets of nucleotides in 16 S rRNA.

1 reference

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17 June 2018

Identification of intermolecular RNA cross-links at the subunit interface of the Escherichia coli ribosome

1 reference

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17 June 2018

Codon-anticodon interaction at the ribosomal peptidyl-site

1 reference

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17 June 2018

Photochemical cross-linking of elongation factor G to 70-S ribosomes from Escherichia coli by 4-(6-formyl-3-azidophenoxy)butyrimidate

1 reference

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20 August 2018

Interaction of tRNA with 23S rRNA in the ribosomal A, P, and E sites

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=336901

20 August 2018

The binding of purified Phe-tRNA and peptidyl-tRNA Phe to Escherichia coli ribosomes

1 reference

https://pubmed.ncbi.nlm.nih.gov/1614849

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Distance moved by transfer RNA during translocation from the A site to the P site on the ribosome

1 reference

https://pubmed.ncbi.nlm.nih.gov/1614849

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Comparison of Escherichia coli tRNAPhe in the Free State, in the Ternary Complex and in the Ribosomal A and P Sites by Chemical Probing

1 reference

https://pubmed.ncbi.nlm.nih.gov/1614849

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Structural study of translating 70 S ribosomes from Escherichia coli. I. Electron microscopy

1 reference

https://pubmed.ncbi.nlm.nih.gov/1614849

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Quantitative study of interaction of deacylated tRNA with Escherichia coli ribosomes. Role of 50 S subunits in formation of the E site

1 reference

https://pubmed.ncbi.nlm.nih.gov/1614849

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Topological arrangement of two transfer RNAs on the ribosome. Fluorescence energy transfer measurements between A and P site-bound tRNAphe

1 reference

https://pubmed.ncbi.nlm.nih.gov/1614849

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

High resolution localization of the tRNA anticodon interaction site on the Escherichia coli 30 S ribosomal subunit

1 reference

https://pubmed.ncbi.nlm.nih.gov/1614849

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Chemical cross-linking of elongation factor G to both subunits of the 70-S ribosomes from Escherichia coli

1 reference

https://pubmed.ncbi.nlm.nih.gov/1614849

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Crystal structure of yeast tRNAAsp

1 reference

https://pubmed.ncbi.nlm.nih.gov/1614849

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Determination of tRNA nucleotide residues directly interacting with proteins in the post- and pretranslocated ribosomal complexes

1 reference

https://pubmed.ncbi.nlm.nih.gov/1614849

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Localization of the elongation factor G on Escherichia coli ribosome

1 reference

https://pubmed.ncbi.nlm.nih.gov/1614849

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Effect of translocation on topology and conformation of anticodon and D loops of tRNAPhe

1 reference

https://pubmed.ncbi.nlm.nih.gov/1614849

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A study of the interaction of Escherichia coli elongation factor-Tu with aminoacyl-tRNAs by partial digestion with cobra venom ribonuclease

1 reference

https://pubmed.ncbi.nlm.nih.gov/1614849

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Immunoelectron microscopic localization of puromycin binding on the large subunit of the Escherichia coli ribosome

1 reference

https://pubmed.ncbi.nlm.nih.gov/1614849

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Transient kinetics of transfer ribonucleic acid binding to the ribosomal A and P sites: observation of a common intermediate complex

1 reference

https://pubmed.ncbi.nlm.nih.gov/1614849

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

BINDING OF TRANSFER RIBONUCLEIC ACID TO RIBOSOMES ENGAGED IN PROTEIN SYNTHESIS: NUMBER AND PROPERTIES OF RIBOSOMAL BINDING SITES

1 reference

https://pubmed.ncbi.nlm.nih.gov/1614849

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Models for two tRNAs bound to successive codons on mRNA on the ribosome

1 reference

https://pubmed.ncbi.nlm.nih.gov/1614849

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Ribosome structure determined by electron microscopy of Escherichia coli small subunits, large subunits and monomeric ribosomes

1 reference

https://pubmed.ncbi.nlm.nih.gov/1614849

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Localization of ribosomal proteins L7L12 in the 50 S subunit of Escherichia coli Ribosomes by electron microscopy

1 reference

https://pubmed.ncbi.nlm.nih.gov/1614849

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The side-by-side model of two tRNA molecules allowing the α-helical conformation of the nascent polypeptide during the ribosomal transpeptidation

1 reference

https://pubmed.ncbi.nlm.nih.gov/1614849

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Model for the three-dimensional folding of 16 S ribosomal RNA

1 reference

https://pubmed.ncbi.nlm.nih.gov/1614849

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Nucleotide residues of tRNA, directly interacting with proteins within the complex of the 30 S subunit of E. coli ribosome with poly(U) and NAcPhe-tRNA(Phe)

1 reference

https://pubmed.ncbi.nlm.nih.gov/1614849

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A stereochemical model of the transpeptidation complex

1 reference

https://pubmed.ncbi.nlm.nih.gov/1614849

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Immune electron microscopic localization of dinitrophenyl-modified ribosomal protein S19 in reconstituted Escherichia coli 30 S subunits using antibodies to dinitrophenol

1 reference

https://pubmed.ncbi.nlm.nih.gov/1614849

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Localization of elongation factor Tu on the ribosome

1 reference

https://pubmed.ncbi.nlm.nih.gov/1614849

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Determination of the location of proteins L14, L17, L18, L19, L22 and L23 on the surface of the 50S ribosomal subunit of Escherichia coli by immune electron microscopy

1 reference

https://pubmed.ncbi.nlm.nih.gov/1614849

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1093/NAR/20.11.2627

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:1614849%20AND%20SRC:MED&resulttype=core&format=json

22 September 2019

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:1614849%20AND%20SRC:MED&resulttype=core&format=json

22 September 2019

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:1614849%20AND%20SRC:MED&resulttype=core&format=json

22 September 2019

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