Minimal conditions for exonization of intronic sequences: 5' splice site formation in alu exons (Q40564535)

21 September 2017

title

Minimal conditions for exonization of intronic sequences: 5' splice site formation in alu exons (English)

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21 September 2017

Rotem Sorek

1

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21 September 2017

Galit Lev-Maor

2

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21 September 2017

Mika Reznik

3

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21 September 2017

Tal Dagan

4

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21 September 2017

Frida Belinky

5

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21 September 2017

Dan Graur

6

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21 September 2017

Gil Ast

7

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21 September 2017

publication date

1 April 2004

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21 September 2017

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21 September 2017

volume

14

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21 September 2017

issue

2

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21 September 2017

page(s)

221-231

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Crystal structure of unmodified tRNA(Gln) complexed with glutaminyl-tRNA synthetase and ATP suggests a possible role for pseudo-uridines in stabilization of RNA structure

21 September 2017

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7 January 2021

Structure and variability of recently inserted Alu family members

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7 January 2021

Protein diversity from alternative splicing: a challenge for bioinformatics and post-genome biology

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7 January 2021

Alternative splicing and genome complexity

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7 January 2021

RNAs from all categories generate retrosequences that may be exapted as novel genes or regulatory elements

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7 January 2021

Allosteric cascade of spliceosome activation

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7 January 2021

Prediction of complete gene structures in human genomic DNA

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7 January 2021

Comparative analysis detects dependencies among the 5' splice-site positions

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7 January 2021

Listening to silence and understanding nonsense: exonic mutations that affect splicing

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7 January 2021

U1 small nuclear RNAs with altered specificity can be stably expressed in mammalian cells and promote permanent changes in pre-mRNA splicing

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7 January 2021

AluGene: a database of Alu elements incorporated within protein-coding genes

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7 January 2021

Mammalian retroelements.

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7 January 2021

LINE-mediated retrotransposition of marked Alu sequences

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7 January 2021

The human prostate-specific transglutaminase gene (TGM4): genomic organization, tissue-specific expression, and promoter characterization

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7 January 2021

Human genomic sequences that inhibit splicing

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7 January 2021

Analysis of the role of Caenorhabditis elegans GC-AG introns in regulated splicing

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7 January 2021

Enzymatic mechanisms in corneal ulceration with specific reference to familial dysautonomia: potential for genetic approaches.

1 reference

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7 January 2021

A novel approach to describe a U1 snRNA binding site.

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7 January 2021

Alternative splicing: increasing diversity in the proteomic world

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7 January 2021

A question of size: the eukaryotic proteome and the problems in defining it.

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7 January 2021

Pre-mRNA splicing in the new millennium

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7 January 2021

Human HPK1, a novel human hematopoietic progenitor kinase that activates the JNK/SAPK kinase cascade

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7 January 2021

Genomic organisation and alternative splicing of human RIM1, a gene implicated in autosomal dominant cone-rod dystrophy (CORD7)

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7 January 2021

Reconstruction and analysis of human alu genes

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7 January 2021

Splice-mediated insertion of an Alu sequence in the COL4A3 mRNA causing autosomal recessive Alport syndrome.

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7 January 2021

The origins and implications of Aluternative splicing

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7 January 2021

Enzymatic cytosine deamination: friend and foe.

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7 January 2021

Initial sequencing and analysis of the human genome

1 reference

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7 January 2021

The birth of an alternatively spliced exon: 3' splice-site selection in Alu exons

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7 January 2021

Stop codons affect 5' splice site selection by surveillance of splicing

1 reference

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7 January 2021

A role for the Psi-U mismatch in the recognition of the 5' splice site of yeast introns by the U1 small nuclear ribonucleoprotein particle

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2804%2900181-9

7 January 2021

Alu sequences in the coding regions of mRNA: a source of protein variability

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2804%2900181-9

7 January 2021

Splicing of an anti-sense Alu sequence generates a coding sequence variant for the alpha-3 subunit of a neuronal acetylcholine receptor

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2804%2900181-9

7 January 2021

Alternative splicing in lecithin:cholesterol acyltransferase mRNA: an evolutionary paradigm in humans and great apes

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2804%2900181-9

7 January 2021

Splice-mediated insertion of an Alu sequence inactivates ornithine delta-aminotransferase: a role for Alu elements in human mutation

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2804%2900181-9

7 January 2021

A genomic view of alternative splicing

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2804%2900181-9

7 January 2021

Alternative splicing in the human, mouse and rat genomes is associated with an increased frequency of exon creation and/or loss

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2804%2900181-9

7 January 2021

Splicing regulation as a potential genetic modifier

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2804%2900181-9

7 January 2021

Intrinsic differences between authentic and cryptic 5' splice sites

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2804%2900181-9

7 January 2021

RNA splice junctions of different classes of eukaryotes: sequence statistics and functional implications in gene expression

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2804%2900181-9

7 January 2021

Intronic sequences flanking alternatively spliced exons are conserved between human and mouse

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2804%2900181-9

7 January 2021

Alu-containing exons are alternatively spliced

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2804%2900181-9

7 January 2021

Defects in pre-mRNA processing as causes of and predisposition to diseases

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7 January 2021

Hypermodified nucleosides in the anticodon of tRNA(Lys) stabilize a canonical U-turn structure

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2804%2900181-9

7 January 2021

Identification of beta1C-2, a novel variant of the integrin beta1 subunit generated by utilization of an alternative splice acceptor site in exon C.

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2804%2900181-9

7 January 2021

Human GC-AG alternative intron isoforms with weak donor sites show enhanced consensus at acceptor exon positions

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https://api.crossref.org/works/10.1016%2FS1097-2765%2804%2900181-9

7 January 2021

CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

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https://api.crossref.org/works/10.1016%2FS1097-2765%2804%2900181-9

7 January 2021

Partial deficiency of the C-terminal-domain phosphatase of RNA polymerase II is associated with congenital cataracts facial dysmorphism neuropathy syndrome

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https://api.crossref.org/works/10.1016%2FS1097-2765%2804%2900181-9

7 January 2021

Initial sequencing and comparative analysis of the mouse genome

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2804%2900181-9

7 January 2021

Discovery of novel splice forms and functional analysis of cancer-specific alternative splicing in human expressed sequences

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2804%2900181-9

7 January 2021

Estimation of the transition/transversion rate bias and species sampling.

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2804%2900181-9

7 January 2021

A compensatory base change in U1 snRNA suppresses a 5' splice site mutation

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2804%2900181-9

7 January 2021

On finding all suboptimal foldings of an RNA molecule

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2804%2900181-9

7 January 2021

10.1016/S1097-2765(04)00181-9

Identifiers

DOI

1 reference

21 September 2017

1 reference