PCAP: a whole-genome assembly program (Q40830110)

24 September 2017

PCAP: a whole-genome assembly program (English)

1 reference

24 September 2017

whole genome sequencing

1 reference

4

Shiaw-Pyng Yang

1 reference

24 September 2017

3

Srinivas Aluru

1 reference

24 September 2017

Xiaoqiu Huang

1

1 reference

PMCID

403719

24 September 2017

Jianmin Wang

series ordinal

2

1 reference

PMCID

403719

24 September 2017

LaDeana Hillier

series ordinal

5

1 reference

24 September 2017

1 September 2003

1 reference

24 September 2017

1 reference

24 September 2017

13

1 reference

24 September 2017

2164-2170

1 reference

24 September 2017

9

1 reference

Whole-genome sequence assembly for mammalian genomes: Arachne 2.

24 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403719

Initial sequencing and comparative analysis of the mouse genome

24 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403719

Whole-Genome Shotgun Assembly and Analysis of the Genome of Fugu rubripes

24 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403719

RePS: a sequence assembler that masks exact repeats identified from the shotgun data

24 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403719

ARACHNE: a whole-genome shotgun assembler

24 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403719

An Eulerian path approach to DNA fragment assembly

24 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403719

An optimized protocol for analysis of EST sequences

24 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403719

A whole-genome assembly of Drosophila

24 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403719

CAP3: A DNA sequence assembly program

24 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403719

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

24 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403719

A new computer method for the storage and manipulation of DNA gel reading data

24 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403719

SEQAID: a DNA sequence assembling program based on a mathematical model

24 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403719

24 September 2017

The phusion assembler

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403719

An improved sequence assembly program.

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403719

A contig assembly program based on sensitive detection of fragment overlaps

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403719

Aligning two sequences within a specified diagonal band

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403719

A case study in genome-level fragment assembly.

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403719

AMASS: a structured pattern matching approach to shotgun sequence assembly.

19 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403719

19 August 2018

Identifiers

DOI

10.1101/GR.1390403

1 reference

24 September 2017

1 reference

24 September 2017

1 reference

PMCID

403719