Specificity and functional significance of DNA interaction with the nuclear matrix: new approaches to clarify the old questions (Q40943154)

25 September 2017

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title

Specificity and functional significance of DNA interaction with the nuclear matrix: new approaches to clarify the old questions (English)

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25 September 2017

Razin SV

1

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25 September 2017

Gromova II

series ordinal

2

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25 September 2017

Iarovaia OV

series ordinal

3

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25 September 2017

1 January 1995

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International Review of Cytology

25 September 2017

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25 September 2017

162B

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25 September 2017

405-448

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Interaction with the nuclear matrix of a chimeric construct containing a replication origin and a transcription unit

25 September 2017

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2962623-6

7 January 2021

Organization of DNA replication in Physarum polycephalum. Attachment of origins of replicons and replication forks to the nuclear matrix

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2962623-6

7 January 2021

Drosophila scaffold-attached regions bind nuclear scaffolds and can function as ARS elements in both budding and fission yeasts

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2962623-6

7 January 2021

Hybridization of nuclear matrix attached deoxyribonucleic acid fragments

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2962623-6

7 January 2021

Isolation, characterization, and structure of the folded interphase genome of Drosophila melanogaster

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2962623-6

7 January 2021

Dynamic association of replicating DNA fragments with the nuclear matrix of regenerating liver

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2962623-6

7 January 2021

Isolation and characterization of rat liver nuclear matrixes containing high molecular weight deoxyribonucleic acid

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2962623-6

7 January 2021

Identification of a nuclear protein matrix.

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2962623-6

7 January 2021

Nuclear Protein Matrix: Association with Newly Synthesized DNA

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2962623-6

7 January 2021

Nuclear matrix. Isolation and characterization of a framework structure from rat liver nuclei

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2962623-6

7 January 2021

In situ localization of DNA topoisomerase II, a major polypeptide component of the Drosophila nuclear matrix fraction

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2962623-6

7 January 2021

Protein:DNA interactions at chromosomal loop attachment sites.

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2962623-6

7 January 2021

Chromatin domain surrounding the human interferon-beta gene as defined by scaffold-attached regions

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2962623-6

7 January 2021

Biological significance of unwinding capability of nuclear matrix-associating DNAs

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2962623-6

7 January 2021

Integration of simian virus 40 into cellular DNA occurs at or near topoisomerase II cleavage hot spots induced by VM-26 (teniposide).

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2962623-6

7 January 2021

Multitude of inverted repeats characterizes a class of anchorage sites of chromatin loops to the nuclear matrix

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2962623-6

7 January 2021

DNA fragments associated with chromosome scaffolds

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2962623-6

7 January 2021

A relationship between replicon size and supercoiled loop domains in the eukaryotic genome.

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2962623-6

7 January 2021

The relationship between chromosomal origins of replication and the nuclear matrix during the cell cycle

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2962623-6

7 January 2021

A three-dimensional view of precursor messenger RNA metabolism within the mammalian nucleus

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2962623-6

7 January 2021

Ribonucleic acid precursors are associated with the chick oviduct nuclear matrix

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2962623-6

7 January 2021

Actively transcribed genes are associated with the nuclear matrix

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2962623-6

7 January 2021

A nuclease-derived fragment of metaphase DNA and its relationship to the replicon.

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2962623-6

7 January 2021

Chromosomal loop anchorage of the kappa immunoglobulin gene occurs next to the enhancer in a region containing topoisomerase II sites

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2962623-6

7 January 2021

Chromosomal loop anchorage sites appear to be evolutionarily conserved

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2962623-6

7 January 2021

Spectrofluorometric Measurement of the Binding of Ethidium to Superhelical DNA from Cell Nuclei

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2962623-6

7 January 2021

Mapping sequences in loops of nuclear DNA by their progressive detachment from the nuclear cage.

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2962623-6

7 January 2021

Identification and analysis of a matrix-attachment region 5' of the rat glutamate-dehydrogenase-encoding gene.

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2962623-6

7 January 2021

Nuclear matrix bound V(D)J recombination activity in rat thymus nuclei: an in vitro system

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2962623-6

7 January 2021

A tissue-specific MAR/SAR DNA-binding protein with unusual binding site recognition

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2962623-6

7 January 2021

Permanent attachment of replication origins to the nuclear matrix in BHK-cells

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2962623-6

7 January 2021

Topoisomerase II is a structural component of mitotic chromosome scaffolds.

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2962623-6

7 January 2021

Isolation of a nuclear ribonucleoprotein network that contains heterogeneous RNA and is bound to the nuclear envelope

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2962623-6

7 January 2021

Mapping of structural and transcription-related matrix attachment sites in the alpha-globin gene domain of avian erythroblasts and erythrocytes.

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2962623-6

7 January 2021

On the structural organization of nucleolo-chromosomal ribonucleoproteins

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2962623-6

7 January 2021

Dynamic changes in the higher-level chromatin organization of specific sequences revealed by in situ hybridization to nuclear halos

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2962623-6

7 January 2021

Nuclear structure and the three-dimensional organization of DNA

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2962623-6

7 January 2021

Specific DNA sequences associated with the nuclear matrix in synchronized mouse 3T3 cells

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2962623-6

7 January 2021

Different topoisomerase II antitumor drugs direct similar specific long-range fragmentation of an amplified c-MYC gene locus in living cells and in high-salt-extracted nuclei.

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2962623-6

7 January 2021

Long-range fragmentation of the eukaryotic genome by exogenous and endogenous nucleases proceeds in a specific fashion via preferential DNA cleavage at matrix attachment sites

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2962623-6

7 January 2021

Three breakpoints of variant t(2;8) translocations in Burkitt's lymphoma cells fall within a region 140 kilobases distal from c-myc

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2962623-6

7 January 2021

Nuclear matrix DNA from chicken erythrocytes contains beta-globin gene sequences

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2962623-6

7 January 2021

Visualization of replication factories attached to nucleoskeleton

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2962623-6

7 January 2021

The specificity of human lymphocyte nucleolar DNA long-range fragmentation by endogenous topoisomerase II and exogenous Bal 31 nuclease depends on cell proliferation status

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2962623-6

7 January 2021

Excision of chromosomal DNA loops by treatment of permeabilised cells with Bal 31 nuclease

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2962623-6

7 January 2021

Domains in Chromatin Structure

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2962623-6

7 January 2021

Interaction of DNA with nuclear scaffolds in vitro.

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2962623-6

7 January 2021

Replication occurs at a nucleoskeleton.

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2962623-6

7 January 2021

RNA is synthesized at the nuclear cage

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2962623-6

7 January 2021

Attachment of repeated sequences to the nuclear cage

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2962623-6

7 January 2021

The attachments of chromatin loops to the nucleoskeleton

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2962623-6

7 January 2021

Visualization of focal sites of transcription within human nuclei.

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2962623-6

7 January 2021

Characterization of DNA pattern in the site of permanent attachment to the nuclear matrix located in the vicinity of replication origin

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2962623-6

7 January 2021

Nuclear matrix and transcriptional activity of the mouse alpha-globin gene

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2962623-6

7 January 2021

Scaffold-attached regions from the human interferon beta domain can be used to enhance the stable expression of genes under the control of various promoters

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2962623-6

7 January 2021

Association of DNA with the nuclear lamina in Ehrlich ascites tumor cells

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2962623-6

7 January 2021

Scaffold-associated regions: cis-acting determinants of chromatin structural loops and functional domains

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2962623-6

7 January 2021

Highly localized tracks of specific transcripts within interphase nuclei visualized by in situ hybridization

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2962623-6

7 January 2021

Binding of matrix attachment regions to lamin B1

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2962623-6

7 January 2021

Metaphase chromosome structure: Evidence for a radial loop model

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2962623-6

7 January 2021

Chromosome length and DNA loop size during early embryonic development of Xenopus laevis.

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2962623-6

7 January 2021

Hierarchical binding of DNA fragments derived from scaffold-attached regions: correlation of properties in vitro and function in vivo.

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2962623-6

7 January 2021

Scaffold attachment of DNA loops in metaphase chromosomes.

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2962623-6

7 January 2021

Comparison of DNA loop size and super-coiled domain size in human cells.

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2962623-6

7 January 2021

Supercoiled DNA Folded by Nonhistone Proteins in Cultured Mouse Carcinoma Cells1

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2962623-6

7 January 2021

Mapping replicational sites in the eucaryotic cell nucleus

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2962623-6

7 January 2021

Ultrastructural aspects of the ribonucleo-protein network in nuclei of walker tumor and rat liver

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2962623-6

7 January 2021

Localization of SV40 genes within supercoiled loop domains

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2962623-6

7 January 2021

Apoptotic death in epithelial cells: cleavage of DNA to 300 and/or 50 kb fragments prior to or in the absence of internucleosomal fragmentation.

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2962623-6

7 January 2021

Direct repeats at nuclear matrix-associated DNA regions and their putative control function in the replicating eukaryotic genome

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2962623-6

7 January 2021

Thymic nuclear matrix associated activity is not V(D)J recombinase

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2962623-6

7 January 2021

DNA precursors are channelled to nuclear matrix DNA replication sites

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2962623-6

7 January 2021

A fixed site of DNA replication in eucaryotic cells

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2962623-6

7 January 2021

The structure of histone-depleted metaphase chromosomes

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2962623-6

7 January 2021

The matrix attachment regions of the chicken lysozyme gene co-map with the boundaries of the chromatin domain.

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2962623-6

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2962623-6

7 January 2021

Initiated complexes of RNA polymerase II are concentrated in the nuclear skeleton associated DNA

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2962623-6

7 January 2021

Low ionic strength extraction of nuclease-treated nuclei destroys the attachment of transcriptionally active DNA to the nuclear skeleton.

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2962623-6

7 January 2021

Replication origins are attached to the nuclear skeleton

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2962623-6

7 January 2021

Precise localization of the alpha-globin gene cluster within one of the 20- to 300-kilobase DNA fragments released by cleavage of chicken chromosomal DNA at topoisomerase II sites in vivo: evidence that the fragments are DNA loops or domains

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2962623-6

7 January 2021

Structural-functional organization of chromosomal DNA domains

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2962623-6

7 January 2021

Excision close to matrix attachment regions of the entire chicken alpha-globin gene domain by nuclease S1 and characterization of the framing structures

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2962623-6

7 January 2021

Developmental regulation of topoisomerase II sites and DNase I-hypersensitive sites in the chicken beta-globin locus

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2962623-6

7 January 2021

Stimulation of the topoisomerase II induced DNA cleavage sites in the c-myc protooncogene by antitumor drugs is associated with gene expression

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2962623-6

7 January 2021

DNA loops: structural and functional properties of scaffold-attached regions.

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2962623-6

7 January 2021

The ovalbumin gene is associated with the nuclear matrix of chicken oviduct cells

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2962623-6

7 January 2021

The association of transcriptionally active genes with the nuclear matrix of the chicken oviduct

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2962623-6

7 January 2021

In vivo localization of DNA topoisomerase II cleavage sites on Drosophila heat shock chromatin

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2962623-6

7 January 2021

The anatomy of supercoiled loops in the Drosophila 7F locus.

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2962623-6

7 January 2021

The association of transcribed genes with the nuclear matrix of Drosophila cells during heat shock

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2962623-6

7 January 2021

Higher order nuclear organization: three-dimensional distribution of small nuclear ribonucleoprotein particles

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2962623-6

7 January 2021

Dysfunction of chromosomal loop attachment sites: illegitimate recombination linked to matrix association regions and topoisomerase II.

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2962623-6

7 January 2021

A nuclear DNA attachment element mediates elevated and position-independent gene activity

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2962623-6

7 January 2021

Multiple chromosomal populations of topoisomerase II detected in vivo by time-lapse, three-dimensional wide-field microscopy

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2962623-6

7 January 2021

Chromatin structure, not DNA sequence specificity, is the primary determinant of topoisomerase II sites of action in vivo

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2962623-6

7 January 2021

Attachment of origins of replication to the nuclear matrix and the chromosomal scaffold

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2962623-6

7 January 2021

DNA fragments which specifically bind to isolated nuclear matrix in vitro interact with matrix-associated DNA topoisomerase II.

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2962623-6

7 January 2021

Supercoiled loops and eucaryotic DNA replicaton

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2962623-6

7 January 2021

A matrix/scaffold attachment region binding protein: Identification, purification, and mode of binding

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2962623-6

7 January 2021

Chromosomal subunits in active genes have an altered conformation

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2962623-6

7 January 2021

A central role for chromosome breakage in gene amplification, deletion formation, and amplicon integration

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2962623-6

7 January 2021

Preservation of specific RNA distribution within the chromatin-depleted nuclear substructure demonstrated by in situ hybridization coupled with biochemical fractionation

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2962623-6

7 January 2021

Higher level organization of individual gene transcription and RNA splicing

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2962623-6

7 January 2021

On the structure of tumor cell nuclei

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2962623-6

7 January 2021

10.1016/S0074-7696(08)62623-6

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