Comparative genetics. Systematic discovery of cap-independent translation sequences in human and viral genomes (Q40948268)

25 September 2017

Comparative genetics. Systematic discovery of cap-independent translation sequences in human and viral genomes (English)

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25 September 2017

8

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25 September 2017

5

Noam Stern-Ginossar

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25 September 2017

Shira Weingarten-Gabbay

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object named as

Shira Weingarten-Gabbay

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25 September 2017

Shani Elias-Kirma

2

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25 September 2017

Ronit Nir

3

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25 September 2017

Alexey A Gritsenko

4

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25 September 2017

Zohar Yakhini

6

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25 September 2017

Adina Weinberger

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25 September 2017

language of work or name

English

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publication date

14 January 2016

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25 September 2017

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25 September 2017

351

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25 September 2017

6270

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Genome-wide analysis in vivo of translation with nucleotide resolution using ribosome profiling

25 September 2017

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAD4939

Regulation of translation initiation in eukaryotes: mechanisms and biological targets

21 January 2018

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https://api.crossref.org/works/10.1126%2FSCIENCE.AAD4939

Internal initiation of translation of eukaryotic mRNA directed by a sequence derived from poliovirus RNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAD4939

Cytoplasmic viral replication complexes

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAD4939

Local RNA flexibility perturbation of the IRES element induced by a novel ligand inhibits viral RNA translation

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAD4939

Second cistron in CACNA1A gene encodes a transcription factor mediating cerebellar development and SCA6

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAD4939

RNA regulons in Hox 5' UTRs confer ribosome specificity to gene regulation

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAD4939

Starting at the beginning, middle, and end: translation initiation in eukaryotes

21 January 2018

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https://api.crossref.org/works/10.1126%2FSCIENCE.AAD4939

Structural and functional diversity of viral IRESes

21 January 2018

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https://api.crossref.org/works/10.1126%2FSCIENCE.AAD4939

An mRNA-rRNA base-pairing mechanism for translation initiation in eukaryotes

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAD4939

So you want to know if your message has an IRES?

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAD4939

Genome-wide profiling of human cap-independent translation-enhancing elements

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAD4939

Inferring gene regulatory logic from high-throughput measurements of thousands of systematically designed promoters

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAD4939

Splicing mediates the activity of four putative cellular internal ribosome entry sites

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAD4939

IRESite--a tool for the examination of viral and cellular internal ribosome entry sites

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAD4939

Activating transcription factor 4 is translationally regulated by hypoxic stress

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAD4939

Polypyrimidine tract binding protein regulates IRES-mediated gene expression during apoptosis

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAD4939

An approach to analyse the specific impact of rapamycin on mRNA-ribosome association

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAD4939

Identification of eukaryotic mRNAs that are translated at reduced cap binding complex eIF4F concentrations using a cDNA microarray

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAD4939

Global mRNA stabilization preferentially linked to translational repression during the endoplasmic reticulum stress response

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAD4939

Translational reprogramming following UVB irradiation is mediated by DNA-PKcs and allows selective recruitment to the polysomes of mRNAs encoding DNA repair enzymes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAD4939

Preferential translation of internal ribosome entry site-containing mRNAs during the mitotic cycle in mammalian cells

21 January 2018

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https://api.crossref.org/works/10.1126%2FSCIENCE.AAD4939

Identification of mRNAs that continue to associate with polysomes during hypoxia

21 January 2018

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https://api.crossref.org/works/10.1126%2FSCIENCE.AAD4939

A 9-nt segment of a cellular mRNA can function as an internal ribosome entry site (IRES) and when present in linked multiple copies greatly enhances IRES activity

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAD4939

Identification of two short internal ribosome entry sites selected from libraries of random oligonucleotides

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAD4939

Cap-independent translation of tobacco etch virus is conferred by an RNA pseudoknot in the 5'-leader.

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAD4939

The internal ribosome entry site (IRES) contained within the RNA-binding motif protein 3 (Rbm3) mRNA is composed of functionally distinct elements

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAD4939

Principles of translational control: an overview

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAD4939

A cell cycle-dependent internal ribosome entry site

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAD4939

A search for structurally similar cellular internal ribosome entry sites.

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAD4939

A feature-based approach to modeling protein-DNA interactions

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAD4939

Ribosomal position and contacts of mRNA in eukaryotic translation initiation complexes

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAD4939

Base pairing between hepatitis C virus RNA and 18S rRNA is required for IRES-dependent translation initiation in vivo

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAD4939

HCV IRES interacts with the 18S rRNA to activate the 40S ribosome for subsequent steps of translation initiation

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAD4939

Identification and characterization of a novel cell cycle-regulated internal ribosome entry site

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAD4939

Expression of p53 and p53/47 are controlled by alternative mechanisms of messenger RNA translation initiation

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAD4939

HIV-2 genomic RNA contains a novel type of IRES located downstream of its initiation codon.

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAD4939

NAT1/DAP5/p97 and atypical translational control in the Drosophila Circadian Oscillator

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAD4939

The nonsense-mediated decay RNA surveillance pathway

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAD4939

Regulation of positive-strand RNA virus replication: the emerging role of phosphorylation

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAD4939

The 3' cap-independent translation element of Barley yellow dwarf virus binds eIF4F via the eIF4G subunit to initiate translation

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAD4939

A novel interaction of Cap-binding protein complexes eukaryotic initiation factor (eIF) 4F and eIF(iso)4F with a region in the 3'-untranslated region of satellite tobacco necrosis virus

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAD4939

Cap- and IRES-independent scanning mechanism of translation initiation as an alternative to the concept of cellular IRESs.

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAD4939

Translation initiation mediated by RNA looping

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAD4939

Modified ribosome profiling reveals high abundance of ribosome protected mRNA fragments derived from 3' untranslated regions.

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAD4939

Dom34 rescues ribosomes in 3' untranslated regions

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAD4939

Production of complex nucleic acid libraries using highly parallel in situ oligonucleotide synthesis

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAD4939

Synthesis of high-quality libraries of long (150mer) oligonucleotides by a novel depurination controlled process

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAD4939

Dynamic proteomics in individual human cells uncovers widespread cell-cycle dependence of nuclear proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAD4939

Genomic determinants of the efficiency of internal ribosomal entry sites of viral and cellular origin

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAD4939

High-throughput chromatin immunoprecipitation for genome-wide mapping of in vivo protein-DNA interactions and epigenomic states

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAD4939

Applications of the Restriction Free (RF) cloning procedure for molecular manipulations and protein expression.

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAD4939

Transfer-PCR (TPCR): a highway for DNA cloning and protein engineering

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAD4939

The translation initiation factor DAP5 promotes IRES-driven translation of p53 mRNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAD4939

A selection system for functional internal ribosome entry site (IRES) elements: analysis of the requirement for a conserved GNRA tetraloop in the encephalomyocarditis virus IRES.

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAD4939

21 January 2018

Identifiers

DOI

10.1126/SCIENCE.AAD4939

1 reference

25 September 2017

1 reference