Chromosomal deletion formation system based on Tn5 double transposition: use for making minimal genomes and essential gene analysis (Q40949158)

25 September 2017

Chromosomal deletion formation system based on Tn5 double transposition: use for making minimal genomes and essential gene analysis (English)

1 reference

25 September 2017

Igor Y Goryshin

1

1 reference

25 September 2017

Todd A Naumann

series ordinal

2

1 reference

25 September 2017

Jennifer Apodaca

series ordinal

3

1 reference

25 September 2017

William S Reznikoff

series ordinal

4

1 reference

25 September 2017

language of work or name

1 reference

12 March 2003

1 reference

25 September 2017

10

1 reference

inferred from page(s)

published in

Genome Research

1 reference

25 September 2017

13

1 reference

25 September 2017

4

1 reference

25 September 2017

644-653

1 reference

Minimization of the Escherichia coli genome using a Tn5-targeted Cre/loxP excision system

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=430159

From genetic footprinting to antimicrobial drug targets: examples in cofactor biosynthetic pathways

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=430159

Systematic sequencing of cDNA clones using the transposon Tn5

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=430159

An efficient strategy for large-scale high-throughput transposon-mediated sequencing of cDNA clones

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=430159

Engineering a reduced Escherichia coli genome

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=430159

Tn5 transposase with an altered specificity for transposon ends

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=430159

Recent advances in large-scale transposon mutagenesis

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=430159

Genetic footprinting in bacteria

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=430159

Transposon-based approaches to identify essential bacterial genes

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=430159

Trans catalysis in Tn5 transposition

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=430159

TnAraOut, a transposon-based approach to identify and characterize essential bacterial genes

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=430159

Global transposon mutagenesis and a minimal Mycoplasma genome

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=430159

In vitro transposition of Tn552: a tool for DNA sequencing and mutagenesis

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=430159

Genome-wide expression profiling in Escherichia coli K-12

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=430159

An efficient and accurate integration of mini-Mu transposons in vitro: a general methodology for functional genetic analysis and molecular biology applications.

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=430159

Systematic identification of essential genes by in vitro mariner mutagenesis

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=430159

Simple and efficient generation in vitro of nested deletions and inversions: Tn5 intramolecular transposition

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=430159

In vitro Tn7 mutagenesis of Haemophilus influenzae Rd and characterization of the role of atpA in transformation

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=430159

The complete genome sequence of Escherichia coli K-12

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=430159

Efficient integration of artificial transposons into plasmid targets in vitro: a useful tool for DNA mapping, sequencing and genetic analysis

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=430159

Cellular defects caused by deletion of the Escherichia coli dnaK gene indicate roles for heat shock protein in normal metabolism

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=430159

NotI genomic cleavage map of Escherichia coli K-12 strain MG1655.

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=430159

Partial loss of function mutations in DnaK, the Escherichia coli homologue of the 70-kDa heat shock proteins, affect highly conserved amino acids implicated in ATP binding and hydrolysis

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=430159

Insertional transposon mutagenesis by electroporation of released Tn5 transposition complexes.

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=430159

Gyrase and Topo IV modulate chromosome domain size in vivo.

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=430159

A functional analysis of the Tn5 transposase. Identification of domains required for DNA binding and multimerization

19 August 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/12654720

12 December 2020

inferred from PubMed ID database lookup

Tn5 in vitro transposition

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/12654720

12 December 2020

inferred from PubMed ID database lookup

Molecular genetic analysis of transposase-end DNA sequence recognition: cooperativity of three adjacent base-pairs in specific interaction with a mutant Tn5 transposase

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/12654720

12 December 2020

inferred from PubMed ID database lookup

Identifiers

DOI

10.1101/GR.611403

1 reference

release_zer5rufdffg2rigbfwxn4r4ete

25 September 2017

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/zer5rufdffg2rigbfwxn4r4ete

24 November 2022

mapped directly with Wikidata item

1 reference

25 September 2017

1 reference