Detection and Polarization of Introgression in a Five-Taxon Phylogeny (Q41049748)

26 September 2017

Detection and Polarization of Introgression in a Five-Taxon Phylogeny (English)

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26 September 2017

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James B Pease

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Matthew W Hahn

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2

object named as

Matthew W Hahn

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26 September 2017

17 April 2015

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26 September 2017

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26 September 2017

64

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26 September 2017

4

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26 September 2017

651-662

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Effect of unsampled populations on the estimation of population sizes and migration rates between sampled populations.

26 September 2017

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https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYV023

Discordance of species trees with their most likely gene trees.

21 January 2018

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https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYV023

Gene tree discordance, phylogenetic inference and the multispecies coalescent

21 January 2018

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https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYV023

Testing for ancient admixture between closely related populations

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYV023

Inferring phylogeny and introgression using RADseq data: an example from flowering plants (Pedicularis: Orobanchaceae)

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYV023

Is a new and general theory of molecular systematics emerging?

21 January 2018

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https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYV023

Effect of ancient population structure on the degree of polymorphism shared between modern human populations and ancient hominins

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYV023

Mosquito genomics. Extensive introgression in a malaria vector species complex revealed by phylogenomics

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYV023

Genome sequencing reveals complex speciation in the Drosophila simulans clade

21 January 2018

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https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYV023

A Draft Sequence of the Neandertal Genome

21 January 2018

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https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYV023

TESTING THE CONSTANT-RATE NEUTRAL ALLELE MODEL WITH PROTEIN SEQUENCE DATA.

21 January 2018

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https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYV023

Generating samples under a Wright-Fisher neutral model of genetic variation

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYV023

A statistical approach for distinguishing hybridization and incomplete lineage sorting.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYV023

Speciation with gene flow in equids despite extensive chromosomal plasticity

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYV023

The genomics of speciation in Drosophila: diversity, divergence, and introgression estimated using low-coverage genome sequencing.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYV023

An HMM-based comparative genomic framework for detecting introgression in eukaryotes

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYV023

Neandertal admixture in Eurasia confirmed by maximum-likelihood analysis of three genomes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYV023

Genome-wide evidence for speciation with gene flow in Heliconius butterflies

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYV023

Evaluating the use of ABBA-BABA statistics to locate introgressed loci

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYV023

Detecting hybrid speciation in the presence of incomplete lineage sorting using gene tree incongruence: a model.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYV023

Ancient admixture in human history

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYV023

Denisova admixture and the first modern human dispersals into Southeast Asia and Oceania

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYV023

Reconstructing Indian population history

21 January 2018

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https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYV023

The probability of topological concordance of gene trees and species trees

21 January 2018

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https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYV023

Testing hybridization hypotheses based on incongruent gene trees

21 January 2018

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https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYV023

Seeing ghosts: the effect of unsampled populations on migration rates estimated for sampled populations

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYV023

Do Heliconius butterfly species exchange mimicry alleles?

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYV023

Next-generation hybridization and introgression

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYV023

Ancient structure in Africa unlikely to explain Neanderthal and non-African genetic similarity

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYV023

Parsimonious inference of hybridization in the presence of incomplete lineage sorting

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYV023

The probability of a gene tree topology within a phylogenetic network with applications to hybridization detection

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYV023

Difficulties in Detecting Hybridization

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYV023

21 January 2018

Identifiers

DOI

10.1093/SYSBIO/SYV023

1 reference

26 September 2017

1 reference

PubMed ID

25888025