Mutational analysis of kinetic partitioning in protein folding and protein-DNA binding (Q41199545)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20876193%20AND%20SRC:MED&resulttype=core&format=json

14 February 2020

title

Mutational analysis of kinetic partitioning in protein folding and protein-DNA binding (English)

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14 February 2020

0 references

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1

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14 February 2020

author name string

Diego U Ferreiro

series ordinal

2

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14 February 2020

Gonzalo de Prat Gay

series ordinal

3

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14 February 2020

publication date

27 September 2010

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Protein Engineering Design and Selection

14 February 2020

published in

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14 February 2020

volume

24

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14 February 2020

issue

1-2

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14 February 2020

page(s)

179-184

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Experimental snapshots of a protein-DNA binding landscape

14 February 2020

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3003449

Transition state for protein-DNA recognition

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3003449

The papillomavirus E2 DNA binding domain

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3003449

Atomic force microscopy reveals parallel mechanical unfolding pathways of T4 lysozyme: evidence for a kinetic partitioning mechanism.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3003449

Comprehensive comparison of the interaction of the E2 master regulator with its cognate target DNA sites in 73 human papillomavirus types by sequence statistics

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3003449

Structural and thermodynamic basis for the enhanced transcriptional control by the human papillomavirus strain-16 E2 protein

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3003449

The biotin regulatory system: kinetic control of a transcriptional switch

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3003449

Structural comparison of the two alternative transition states for folding of TI I27.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3003449

Kinetic partitioning of protein folding and aggregation.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3003449

Determinants of DNA mismatch recognition within the polymerase domain of the Klenow fragment

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3003449

Mapping the folding pathway of an immunoglobulin domain: structural detail from Phi value analysis and movement of the transition state

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3003449

Protein folding: how the mechanism of GroEL action is defined by kinetics

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3003449

Immunoglobulin-like modules from titin I-band: extensible components of muscle elasticity

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3003449

Modification of the amino acid specificity of tyrosyl-tRNA synthetase by protein engineering

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3003449

DNA polymerase accuracy and spontaneous mutation rates: frequencies of purine.purine, purine.pyrimidine, and pyrimidine.pyrimidine mismatches during DNA replication

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3003449

A kinetic partitioning model of selective binding of nonnative proteins by the bacterial chaperone SecB.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3003449

The folding of an enzyme. I. Theory of protein engineering analysis of stability and pathway of protein folding

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3003449

A protein-DNA binding mechanism proceeds through multi-state or two-state parallel pathways

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3003449

De novo design, expression, and characterization of Felix: a four-helix bundle protein of native-like sequence

14 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3003449

Comparison of the transition states for folding of two Ig-like proteins from different superfamilies.

14 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3003449

Thermodynamic characterisation of two transition states along parallel protein folding pathways.

19 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3003449

Parallel protein-unfolding pathways revealed and mapped

19 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3003449

The Structure of the Transition State for Folding of Chymotrypsin Inhibitor 2 Analysed by Protein Engineering Methods: Evidence for a Nucleation-condensation Mechanism for Protein Folding

2 December 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3003449

Kinetic partitioning during protein folding yields multiple native states

2 December 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20876193

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Kinetics and thermodynamics of folding of a de novo designed four-helix bundle protein

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20876193

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Three-state model for lysozyme folding: triangular folding mechanism with an energetically trapped intermediate

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20876193

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1093/PROTEIN/GZQ064

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20876193%20AND%20SRC:MED&resulttype=core&format=json

14 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20876193%20AND%20SRC:MED&resulttype=core&format=json

14 February 2020

1 reference