Local interactions in protein folding: lessons from the alpha-helix (Q41340342)

29 September 2017

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title

Local interactions in protein folding: lessons from the alpha-helix (English)

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29 September 2017

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4

Rose GD

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29 September 2017

Aurora R

1

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29 September 2017

Creamer TP

series ordinal

2

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29 September 2017

Srinivasan R

series ordinal

3

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29 September 2017

language of work or name

English

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publication date

1 January 1997

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Journal of Biological Chemistry

29 September 2017

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29 September 2017

272

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29 September 2017

3

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29 September 2017

1413-1416

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The structure of proteins; two hydrogen-bonded helical configurations of the polypeptide chain

29 September 2017

1 reference

https://api.crossref.org/works/10.1074%2FJBC.272.3.1413

A model of myoglobin self-organization

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.272.3.1413

Structural patterns in globular proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.272.3.1413

Hierarchic organization of domains in globular proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.272.3.1413

How does protein folding get started?

21 January 2018

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https://api.crossref.org/works/10.1074%2FJBC.272.3.1413

Origins of structure in globular proteins

21 January 2018

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https://api.crossref.org/works/10.1074%2FJBC.272.3.1413

The origins of protein secondary structure. Effects of packing density and hydrogen bonding studied by a fast conformational search

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.272.3.1413

Optimization of rates of protein folding: the nucleation-condensation mechanism and its implications

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.272.3.1413

Conformation of Polypeptides and Proteins

21 January 2018

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https://api.crossref.org/works/10.1074%2FJBC.272.3.1413

Interaction of the peptide bond with solvent water: a vapor phase analysis

21 January 2018

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https://api.crossref.org/works/10.1074%2FJBC.272.3.1413

Solid model compounds and the thermodynamics of protein unfolding

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.272.3.1413

Unusually stable helix formation in short alanine-based peptides

21 January 2018

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https://api.crossref.org/works/10.1074%2FJBC.272.3.1413

Computation of the sterically allowed conformations of peptides

21 January 2018

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https://api.crossref.org/works/10.1074%2FJBC.272.3.1413

Side-chain entropy opposes alpha-helix formation but rationalizes experimentally determined helix-forming propensities

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.272.3.1413

Dictionary of protein secondary structure: pattern recognition of hydrogen-bonded and geometrical features

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.272.3.1413

Helix signals in proteins

21 January 2018

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https://api.crossref.org/works/10.1074%2FJBC.272.3.1413

A salt bridge stabilizes the helix formed by isolated C-peptide of RNase A

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.272.3.1413

Folding of immunogenic peptide fragments of proteins in water solution. I. Sequence requirements for the formation of a reverse turn

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.272.3.1413

Stability of alpha-helices

21 January 2018

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https://api.crossref.org/works/10.1074%2FJBC.272.3.1413

Hydrogen bonding stabilizes globular proteins

21 January 2018

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https://api.crossref.org/works/10.1074%2FJBC.272.3.1413

Free energy determinants of secondary structure formation: I. alpha-Helices

21 January 2018

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https://api.crossref.org/works/10.1074%2FJBC.272.3.1413

Helix propensities of the amino acids measured in alanine-based peptides without helix-stabilizing side-chain interactions.

21 January 2018

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https://api.crossref.org/works/10.1074%2FJBC.272.3.1413

Protein folding--what's the question?

21 January 2018

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https://api.crossref.org/works/10.1074%2FJBC.272.3.1413

Amino acid preferences for specific locations at the ends of alpha helices

21 January 2018

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https://api.crossref.org/works/10.1074%2FJBC.272.3.1413

van der Waals Volumes and Radii

21 January 2018

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https://api.crossref.org/works/10.1074%2FJBC.272.3.1413

Side chain-backbone hydrogen bonding contributes to helix stability in peptides derived from an alpha-helical region of carboxypeptidase A.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.272.3.1413

Capping interactions in isolated alpha helices: position-dependent substitution effects and structure of a serine-capped peptide helix

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.272.3.1413

Stabilization of alpha-helical structures in short peptides via end capping

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.272.3.1413

Helix capping propensities in peptides parallel those in proteins

21 January 2018

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https://api.crossref.org/works/10.1074%2FJBC.272.3.1413

Capping and alpha-helix stability

21 January 2018

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https://api.crossref.org/works/10.1074%2FJBC.272.3.1413

Contribution to global protein stabilization of the N-capping box in human growth hormone

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.272.3.1413

Sequence determinants of the capping box, a stabilizing motif at the N-termini of alpha-helices

21 January 2018

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https://api.crossref.org/works/10.1074%2FJBC.272.3.1413

The hydrophobic-staple motif and a role for loop-residues in alpha-helix stability and protein folding.

21 January 2018

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https://api.crossref.org/works/10.1074%2FJBC.272.3.1413

Rules for alpha-helix termination by glycine

21 January 2018

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https://api.crossref.org/works/10.1074%2FJBC.272.3.1413

Structural analysis of the N- and C-termini in a peptide with consensus sequence

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.272.3.1413

Theory of the Phase Transition between Helix and Random Coil in Polypeptide Chains

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.272.3.1413

A thermodynamic scale for the helix-forming tendencies of the commonly occurring amino acids

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.272.3.1413

Relative helix-forming tendencies of nonpolar amino acids

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.272.3.1413

Alpha-helix stability in proteins. II. Factors that influence stability at an internal position

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.272.3.1413

Structural basis of amino acid alpha helix propensity

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.272.3.1413

Determination of alpha-helix propensity within the context of a folded protein. Sites 44 and 131 in bacteriophage T4 lysozyme

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.272.3.1413

Empirical scale of side-chain conformational entropy in protein folding

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.272.3.1413

Estimation of changes in side chain configurational entropy in binding and folding: general methods and application to helix formation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.272.3.1413

Use of helical wheels to represent the structures of proteins and to identify segments with helical potential

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.272.3.1413

Amphipathic helix motif: classes and properties

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.272.3.1413

Periodicity of polar and nonpolar amino acids is the major determinant of secondary structure in self-assembling oligomeric peptides

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.272.3.1413

Nature of the charged-group effect on the stability of the C-peptide helix

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.272.3.1413

Dipoles localized at helix termini of proteins stabilize charges

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.272.3.1413

Conformation analysis of L-pyroglutamic acid N-methylamide by depolarized Rayleigh diffusion, vibration spectroscopy, and conformational energy calculation

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.272.3.1413

Interactions between hydrophobic side chains within alpha-helices

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.272.3.1413

Principles that govern the folding of protein chains

21 January 2018

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https://api.crossref.org/works/10.1074%2FJBC.272.3.1413

Experimentally observed conformation-dependent geometry and hidden strain in proteins

21 January 2018

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https://api.crossref.org/works/10.1074%2FJBC.272.3.1413

Equation of State Calculations by Fast Computing Machines

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.272.3.1413

Hydrogen bonding in globular proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.272.3.1413

LINUS: a hierarchic procedure to predict the fold of a protein.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.272.3.1413

The nature of the accessible and buried surfaces in proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.272.3.1413

The pleated sheet, a new layer configuration of polypeptide chains

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.272.3.1413

Interior turns in globular proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.272.3.1413

Helix-stabilizing Interaction Between Tyrosine and Leucine or Valine when the Spacing is i,i + 4

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.272.3.1413

A peptide model of a protein folding intermediate

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.272.3.1413

Tests of the helix dipole model for stabilization of α-helices

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.272.3.1413

21 January 2018

Identifiers

DOI

10.1074/JBC.272.3.1413

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release_w7davpx6yjdhhm65fqakolkj64

29 September 2017

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Fatcat

https://api.fatcat.wiki/v0/release/w7davpx6yjdhhm65fqakolkj64

mapped directly with Wikidata item

24 November 2022

based on heuristic

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