Constraints on codon context in Escherichia coli genes. Their possible role in modulating the efficiency of translation (Q41450922)

30 September 2017

Constraints on codon context in Escherichia coli genes. Their possible role in modulating the efficiency of translation (English)

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30 September 2017

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Shpaer EG

1

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PubMed ID

3525848

30 September 2017

language of work or name

English

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publication date

1 April 1986

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Journal of Molecular Biology

30 September 2017

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30 September 2017

188

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30 September 2017

4

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30 September 2017

555-564

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Effect of neighboring nucleotide sequences on suppression efficiency in amber mutants of T4 phage lysozyme

30 September 2017

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2886%2980005-5

The nucleotide sequence of tufB and four nearby tRNA structural genes of Escherichia coli.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2886%2980005-5

Organization and nucleotide sequence of a new ribosomal operon in Escherichia coli containing the genes for ribosomal protein S2 and elongation factor Ts.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2886%2980005-5

Nucleotide sequence of the gene ompA coding the outer membrane protein II*of Escherichia coli K-12

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2886%2980005-5

Context effects: Translation of UAG codon by suppressor tRNA is affected by the sequence following UAG in the message

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2886%2980005-5

The influence of codon context on genetic code translation

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2886%2980005-5

The nudeotide sequence of the cloned rpoD gene for the RNA polymerase sigma subunit from E. coil K12

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2886%2980005-5

The operon that encodes the sigma subunit of RNA polymerase also encodes ribosomal protein S21 and DNA primase in E. coli K12.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2886%2980005-5

An effect of codon context on the mistranslation of UGU codons in vitro.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2886%2980005-5

A functional requirement for modification of the wobble nucleotide in tha anticodon of a T4 suppressor tRNA

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2886%2980005-5

A mutation of the wobble nucleotide of a bacteriophage T4 transfer RNA

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2886%2980005-5

A speculation on the origin of protein synthesis

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2886%2980005-5

Amino acid sequence homology between cholera toxin and Escherichia coli heat-labile toxin.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2886%2980005-5

Sequence of the lacI gene

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2886%2980005-5

Coding properties of an ochre-suppressing derivative of Escherichia coli tRNAITyr

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2886%2980005-5

Isolation and characterization of context mutations affecting the suppressibility of nonsense mutations

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2886%2980005-5

The influence of the reading context upon the suppression of nonsense codons

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2886%2980005-5

Nucleotides contiguous to AUG affect translational initiation

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2886%2980005-5

The atp operon: nucleotide sequence of the region encoding the α-subunit of Escherichia coli ATP-synthase

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2886%2980005-5

The atp operon: nucleotide sequence of the promoter and the genes for the membrane proteins, and the delta subunit of Escherichia coli ATP-synthase

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2886%2980005-5

Codon usage in bacteria: correlation with gene expressivity

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2886%2980005-5

Polypeptide elongation and tRNA cycling in Escherichia coli: a dynamic approach

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2886%2980005-5

Codon catalog usage is a genome strategy modulated for gene expressivity

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2886%2980005-5

Preferential codon usage in prokaryotic genes: the optimal codon-anticodon interaction energy and the selective codon usage in efficiently expressed genes

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2886%2980005-5

Bacteriophage MS2 RNA: A correlation between the stability of the codon: Anticodon interaction and the choice of code words

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2886%2980005-5

DNA sequence analysis of the transposon Tn3: Three genes and three sites involved in transposition of Tn3

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2886%2980005-5

Correlation between the abundance of Escherichia coli transfer RNAs and the occurrence of the respective codons in its protein genes

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2886%2980005-5

Correlation between the abundance of Escherichia coli transfer RNAs and the occurrence of the respective codons in its protein genes: A proposal for a synonymous codon choice that is optimal for the E. coli translational system

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2886%2980005-5

Codon specificity of starvation induced misreading

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2886%2980005-5

Usage of the three termination codons: compilation and analysis of the known eukaryotic and prokaryotic translation termination sequences

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2886%2980005-5

Contextual constraints on synonymous codon choice

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2886%2980005-5

Initiator-tRNA recognizes a tetranucleotide codon during the 30 S initiation complex formation

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2886%2980005-5

Effects of surrounding sequence on the suppression of nonsense codons

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2886%2980005-5

DNA sequence of the araC regulatory gene from Escherichia coli B/r

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2886%2980005-5

Restricted wobble in UGA codon recognition by glycine tRNA suppressors of UGG

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2886%2980005-5

Codon context effects in missense suppression

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2886%2980005-5

DNA sequence of the gene for the outer membrane lipoprotein of E. coli: an extremely AT-rich promoter

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2886%2980005-5

A semi-quantitative treatment of missense and nonsense suppression in the strA and ram ribosomal mutants of Escherichia coli Evaluation of some molecular parameters of translation in vivo

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2886%2980005-5

The universal dinucleotide asymmetry rules in DNA and the amino acid codon choice

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2886%2980005-5

The Primary Structure of Escherichia coli RNA Polymerase. Nucleotide Sequence of the rpoB Gene and Amino-Acid Sequence of the beta-Subunit

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2886%2980005-5

The primary structure otE. coliRNA porymerase. Nucleotide sequence of the rpoC gene and amino acid sequence of the β′-sabunit

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2886%2980005-5

Codon usage can affect efficiency of translation of genes inEscherichia coli

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2886%2980005-5

The influence of the reading context upon the suppression of nonsense codons

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2886%2980005-5

The atp operon: nucleotide sequence of the genes for the γ, β, and ε subunits of Escherichia coli ATP synthase

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2886%2980005-5

The secondary structure of mRNAs from Escherichia coli: its possible role in increasing the accuracy of translation

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2886%2980005-5

Graphic methods to determine the function of nucleic acid sequences

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2886%2980005-5

Measurements of the effects that coding for a protein has on a DNA sequence and their use for finding genes

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2886%2980005-5

Regulation of diaminopimelate decarboxylase synthesis in Escherichia coli. III. Nucleotide sequence and regulation of the lysR gene.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2886%2980005-5

A novel method for site-directed mutagenesis: its application to an eukaryotic tRNAPro gene promoter

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2886%2980005-5

Sense codons are found in specific contexts.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2886%2980005-5

The nucleotide sequence of the cloned tufA gene of Escherichia coli.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2886%2980005-5

10.1016/S0022-2836(86)80005-5

7 January 2021

Identifiers

DOI

1 reference

30 September 2017

1 reference

PubMed ID

3525848