Template recognition mechanisms by replicase proteins differ between bipartite positive-strand genomic RNAs of a plant virus (Q41591874)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20980498%20AND%20SRC:MED&resulttype=core&format=json

14 January 2020

title

Template recognition mechanisms by replicase proteins differ between bipartite positive-strand genomic RNAs of a plant virus (English)

1 reference

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14 January 2020

1 reference

2

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14 January 2020

Mengnan An

4

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14 January 2020

author name string

Hiro-Oki Iwakawa

1

1 reference

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14 January 2020

Kiwamu Hyodo

3

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14 January 2020

Masanori Kaido

5

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14 January 2020

Kazuyuki Mise

6

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14 January 2020

Tetsuro Okuno

7

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14 January 2020

language of work or name

English

0 references

publication date

27 October 2010

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14 January 2020

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14 January 2020

volume

85

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14 January 2020

issue

1

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14 January 2020

page(s)

497-509

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A Y-shaped RNA structure in the 3' untranslated region together with the trans-activator and core promoter of Red clover necrotic mosaic virus RNA2 is required for its negative-strand RNA synthesis

14 January 2020

cites work

1 reference

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Identification and characterization of the 480-kilodalton template-specific RNA-dependent RNA polymerase complex of red clover necrotic mosaic virus.

6 June 2018

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Three-way RNA junctions with remote tertiary contacts: a recurrent and highly versatile fold

6 June 2018

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Host-dependent roles of the viral 5' untranslated region (UTR) in RNA stabilization and cap-independent translational enhancement mediated by the 3' UTR of Red clover necrotic mosaic virus RNA1.

6 June 2018

1 reference

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Replication of Tomato bushy stunt virus RNA in a plant in vitro system

6 June 2018

1 reference

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5' cis Elements Direct Nodavirus RNA1 Recruitment to Mitochondrial Sites of Replication Complex Formation

6 June 2018

1 reference

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In vitro assembly of the Tomato bushy stunt virus replicase requires the host Heat shock protein 70

6 June 2018

1 reference

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A Viral Noncoding RNA Generated by cis-Element-Mediated Protection against 5'->3' RNA Decay Represses both Cap-Independent and Cap-Dependent Translation

6 June 2018

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Nodavirus RNA replication protein a induces membrane association of genomic RNA.

6 June 2018

1 reference

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Identification of a ribonucleoprotein intermediate of tomato mosaic virus RNA replication complex formation.

6 June 2018

1 reference

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Membrane-bound tomato mosaic virus replication proteins participate in RNA synthesis and are associated with host proteins in a pattern distinct from those that are not membrane bound

6 June 2018

1 reference

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Enhancement of the StreptoTag method for isolation of endogenously expressed proteins with complex RNA binding targets

6 June 2018

1 reference

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A plant RNA virus suppresses RNA silencing through viral RNA replication

6 June 2018

1 reference

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Specific binding of tombusvirus replication protein p33 to an internal replication element in the viral RNA is essential for replication

6 June 2018

1 reference

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The red clover necrotic mosaic virus RNA2 trans-activator is also a cis-acting RNA2 replication element

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3014169

Replicase-binding sites on plus- and minus-strand brome mosaic virus RNAs and their roles in RNA replication in plant cells

6 June 2018

1 reference

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Replication of plant RNA virus genomes in a cell-free extract of evacuolated plant protoplasts

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3014169

Cap-Independent Translational Enhancement by the 3′ Untranslated Region of Red Clover Necrotic Mosaic Virus RNA1

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3014169

Characterization of the RNA-binding domains in the replicase proteins of tomato bushy stunt virus

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3014169

A positive-strand RNA virus replication complex parallels form and function of retrovirus capsids

6 June 2018

1 reference

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Poliovirus RNA replication requires genome circularization through a protein-protein bridge

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3014169

Brome mosaic virus Protein 1a recruits viral RNA2 to RNA replication through a 5' proximal RNA2 signal

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3014169

Sequences at the 3' untranslated region of bamboo mosaic potexvirus RNA interact with the viral RNA-dependent RNA polymerase

6 June 2018

1 reference

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Translating ribosomes inhibit poliovirus negative-strand RNA synthesis.

6 June 2018

1 reference

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A brome mosaic virus intergenic RNA3 replication signal functions with viral replication protein 1a to dramatically stabilize RNA in vivo.

6 June 2018

1 reference

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Mutational analysis of cis-acting sequences in the 3'- and 5'-untranslated regions of RNA2 of red clover necrotic mosaic virus

6 June 2018

1 reference

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Sequence element required for efficient -1 ribosomal frameshifting in red clover necrotic mosaic dianthovirus

6 June 2018

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Switch from translation to RNA replication in a positive-stranded RNA virus

6 June 2018

1 reference

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Uncoupled expression of p33 and p92 permits amplification of tomato bushy stunt virus RNAs.

6 June 2018

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Brome mosaic virus RNA replication protein 1a dramatically increases in vivo stability but not translation of viral genomic RNA3.

6 June 2018

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Analysis of the VPg-proteinase (NIa) encoded by tobacco etch potyvirus: effects of mutations on subcellular transport, proteolytic processing, and genome amplification

6 June 2018

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Accumulation of alfalfa mosaic virus RNAs 1 and 2 requires the encoded proteins in cis

6 June 2018

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Roles of the sequence encoding tobacco etch virus capsid protein in genome amplification: requirements for the translation process and a cis-active element.

6 June 2018

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Synthesis of the putative red clover necrotic mosaic virus RNA polymerase by ribosomal frameshifting in vitro

6 June 2018

1 reference

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Cis-preferential replication of the turnip yellow mosaic virus RNA genome

6 June 2018

1 reference

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Identification and analysis of the site of -1 ribosomal frameshifting in red clover necrotic mosaic virus

6 June 2018

1 reference

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A cis-acting function for the coronavirus leader in defective interfering RNA replication.

6 June 2018

1 reference

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Coupling between genome translation and replication in an RNA virus

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3014169

Immunodetection, Expression Strategy and Complementation of Turnip Crinkle Virus p28 and p88 Replication Components

6 June 2018

1 reference

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Dissociation of mammalian polyribosomes into subunits by puromycin

6 June 2018

1 reference

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The dianthoviruses: a distinct group of isometric plant viruses with bipartite genome

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3014169

The nucleotide sequence and gene organization of red clover necrotic mosaic virus RNA-2

6 June 2018

1 reference

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In vitro construction of poliovirus defective interfering particles

6 June 2018

1 reference

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Red clover necrotic mosaic virus infectious transcripts synthesized in vitro

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3014169

The phylogeny of RNA-dependent RNA polymerases of positive-strand RNA viruses

6 June 2018

1 reference

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Cell-free, de novo synthesis of poliovirus

6 June 2018

1 reference

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Three poliovirus 2B mutants exhibit noncomplementable defects in viral RNA amplification and display dosage-dependent dominance over wild-type poliovirus

6 June 2018

1 reference

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Interactions between p27 and p88 replicase proteins of Red clover necrotic mosaic virus play an essential role in viral RNA replication and suppression of RNA silencing via the 480-kDa viral replicase complex assembly.

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3014169

Three discontinuous loop nucleotides in the 3' terminal stem-loop are required for Red clover necrotic mosaic virus RNA-2 replication

19 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3014169

Identification of an Arabidopsis thaliana protein that binds to tomato mosaic virus genomic RNA and inhibits its multiplication

19 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3014169

The bipartite genome of red clover necrotic mosaic virus

19 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3014169

cis-Preferential requirement of a -1 frameshift product p88 for the replication of Red clover necrotic mosaic virus RNA1.

19 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3014169

cis-Acting core RNA elements required for negative-strand RNA synthesis and cap-independent translation are separated in the 3'-untranslated region of Red clover necrotic mosaic virus RNA1.

19 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3014169

Cap-independent translation mechanism of red clover necrotic mosaic virus RNA2 differs from that of RNA1 and is linked to RNA replication

19 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3014169

Role of an internal and two 3'-terminal RNA elements in assembly of tombusvirus replicase

19 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3014169

Membrane-anchored prolyl hydroxylase with an export signal from the endoplasmic reticulum

19 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3014169

Red clover necrotic mosaic virus replication proteins accumulate at the endoplasmic reticulum

19 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3014169

Functions of the 126- and 183-kDa proteins of tobacco mosaic virus

19 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3014169

StreptoTag: a novel method for the isolation of RNA-binding proteins

19 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3014169

Cis-acting functions of alfalfa mosaic virus proteins involved in replication and encapsidation of viral RNA.

19 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3014169

RNA-mediated trans-activation of transcription from a viral RNA.

19 August 2018

1 reference

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Mapping of the red clover necrotic mosaic virus subgenomic RNA.

19 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3014169

The roles of the red clover necrotic mosaic virus capsid and cell-to-cell movement proteins in systemic infection

19 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3014169

Endoplasmic reticulum targeting of the Red clover necrotic mosaic virus movement protein is associated with the replication of viral RNA1 but not that of RNA2

19 August 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20980498

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

The role of the p33:p33/p92 interaction domain in RNA replication and intracellular localization of p33 and p92 proteins of Cucumber necrosis tombusvirus

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20980498

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1128/JVI.01754-10

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20980498%20AND%20SRC:MED&resulttype=core&format=json

release_2rdq24amyfaudnlcmjacbjqk3e

14 January 2020

Fatcat ID

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/2rdq24amyfaudnlcmjacbjqk3e

mapped directly with Wikidata item

24 November 2022

based on heuristic

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20980498%20AND%20SRC:MED&resulttype=core&format=json

14 January 2020

PubMed publication ID

20980498

1 reference