Modern methods for probing RNA structure. (Q41721465)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9503589%20AND%20SRC:MED&resulttype=core&format=json

10 November 2019

review article

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title

Modern methods for probing RNA structure (English)

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9503589%20AND%20SRC:MED&resulttype=core&format=json

10 November 2019

1

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10 November 2019

author name string

J Egebjerg

series ordinal

2

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9503589%20AND%20SRC:MED&resulttype=core&format=json

10 November 2019

publication date

1 February 1998

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Current Opinion in Biotechnology

10 November 2019

published in

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9503589%20AND%20SRC:MED&resulttype=core&format=json

10 November 2019

volume

9

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9503589%20AND%20SRC:MED&resulttype=core&format=json

10 November 2019

issue

1

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9503589%20AND%20SRC:MED&resulttype=core&format=json

10 November 2019

page(s)

59-65

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9503589%20AND%20SRC:MED&resulttype=core&format=json

Structure of yeast phenylalanine tRNA at 3 Å resolution

10 November 2019

cites work

1 reference

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7 January 2021

Three-Dimensional Structure of Yeast Phenylalanine Transfer RNA: Folding of the Polynucleotide Chain

1 reference

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7 January 2021

Three-dimensional structure of a hammerhead ribozyme

1 reference

https://api.crossref.org/works/10.1016%2FS0958-1669%2898%2980085-2

7 January 2021

Capturing the structure of a catalytic RNA intermediate: the hammerhead ribozyme

1 reference

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7 January 2021

The crystal structure of an all-RNA hammerhead ribozyme: a proposed mechanism for RNA catalytic cleavage

1 reference

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7 January 2021

Crystal structure at 1.92 A resolution of the RNA-binding domain of the U1A spliceosomal protein complexed with an RNA hairpin

1 reference

https://api.crossref.org/works/10.1016%2FS0958-1669%2898%2980085-2

7 January 2021

The three-dimensional structures of two complexes between recombinant MS2 capsids and RNA operator fragments reveal sequence-specific protein-RNA interactions

1 reference

https://api.crossref.org/works/10.1016%2FS0958-1669%2898%2980085-2

7 January 2021

Crystal structure of a group I ribozyme domain: principles of RNA packing

1 reference

https://api.crossref.org/works/10.1016%2FS0958-1669%2898%2980085-2

7 January 2021

Structure of an RNA double helix including uracil-uracil base pairs in an internal loop

1 reference

https://api.crossref.org/works/10.1016%2FS0958-1669%2898%2980085-2

7 January 2021

A curved RNA helix incorporating an internal loop with G.A and A.A non-Watson-Crick base pairing

1 reference

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7 January 2021

Crystallization of ribozymes and small RNA motifs by a sparse matrix approach

1 reference

https://api.crossref.org/works/10.1016%2FS0958-1669%2898%2980085-2

7 January 2021

Preparative in vitro mRNA synthesis using SP6 and T7 RNA polymerases.

1 reference

https://api.crossref.org/works/10.1016%2FS0958-1669%2898%2980085-2

7 January 2021

A hammerhead ribozyme allows synthesis of a new form of theTetrahymenaribozyme homogeneous in length with a 3' end blocked for transesterification

1 reference

https://api.crossref.org/works/10.1016%2FS0958-1669%2898%2980085-2

7 January 2021

Crystals by design: a strategy for crystallization of a ribozyme derived from the Tetrahymena group I intron

1 reference

https://api.crossref.org/works/10.1016%2FS0958-1669%2898%2980085-2

7 January 2021

How accurately and precisely can RNA structure be determined by NMR?

1 reference

https://api.crossref.org/works/10.1016%2FS0958-1669%2898%2980085-2

7 January 2021

Recent solution structures of RNA and its complexes with drugs, peptides and proteins

1 reference

https://api.crossref.org/works/10.1016%2FS0958-1669%2898%2980085-2

7 January 2021

A characteristic bent conformation of RNA pseudoknots promotes -1 frameshifting during translation of retroviral RNA.

1 reference

https://api.crossref.org/works/10.1016%2FS0958-1669%2898%2980085-2

7 January 2021

The structure of an RNA "kissing" hairpin complex of the HIV TAR hairpin loop and its complement

1 reference

https://api.crossref.org/works/10.1016%2FS0958-1669%2898%2980085-2

7 January 2021

Bent helix formation between RNA hairpins with complementary loops

1 reference

https://api.crossref.org/works/10.1016%2FS0958-1669%2898%2980085-2

7 January 2021

Specificity of ribonucleoprotein interaction determined by RNA folding during complex formulation

1 reference

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7 January 2021

Structure of the A site of Escherichia coli 16S ribosomal RNA complexed with an aminoglycoside antibiotic

1 reference

https://api.crossref.org/works/10.1016%2FS0958-1669%2898%2980085-2

7 January 2021

Alpha helix-RNA major groove recognition in an HIV-1 rev peptide-RRE RNA complex

1 reference

https://api.crossref.org/works/10.1016%2FS0958-1669%2898%2980085-2

7 January 2021

Solution structure of a bovine immunodeficiency virus Tat-TAR peptide-RNA complex

1 reference

https://api.crossref.org/works/10.1016%2FS0958-1669%2898%2980085-2

7 January 2021

Structural basis of RNA folding and recognition in an AMP-RNA aptamer complex

1 reference

https://api.crossref.org/works/10.1016%2FS0958-1669%2898%2980085-2

7 January 2021

Structural basis of ligand discrimination by two related RNA aptamers resolved by NMR spectroscopy

1 reference

https://api.crossref.org/works/10.1016%2FS0958-1669%2898%2980085-2

7 January 2021

Interlocking structural motifs mediate molecular discrimination by a theophylline-binding RNA

1 reference

https://api.crossref.org/works/10.1016%2FS0958-1669%2898%2980085-2

7 January 2021

A molecular contortionist

1 reference

https://api.crossref.org/works/10.1016%2FS0958-1669%2898%2980085-2

7 January 2021

Rules for RNA recognition of GNRA tetraloops deduced by invitro selection: comparison with invivo evolution

1 reference

https://api.crossref.org/works/10.1016%2FS0958-1669%2898%2980085-2

7 January 2021

Model for an RNA tertiary interaction from the structure of an intermolecular complex between a GAAA tetraloop and an RNA helix.

1 reference

https://api.crossref.org/works/10.1016%2FS0958-1669%2898%2980085-2

7 January 2021

RNA tertiary structure mediation by adenosine platforms

1 reference

https://api.crossref.org/works/10.1016%2FS0958-1669%2898%2980085-2

7 January 2021

A magnesium ion core at the heart of a ribozyme domain

1 reference

https://api.crossref.org/works/10.1016%2FS0958-1669%2898%2980085-2

7 January 2021

RNA structures and folding: from conventional to new issues in structure predictions

1 reference

https://api.crossref.org/works/10.1016%2FS0958-1669%2898%2980085-2

7 January 2021

An analysis of large rRNA sequences folded by a thermodynamic method.

1 reference

https://api.crossref.org/works/10.1016%2FS0958-1669%2898%2980085-2

7 January 2021

Joining the two domains of a group I ribozyme to form the catalytic core

1 reference

https://api.crossref.org/works/10.1016%2FS0958-1669%2898%2980085-2

7 January 2021

The Ribosomal Database Project (RDP).

1 reference

https://api.crossref.org/works/10.1016%2FS0958-1669%2898%2980085-2

7 January 2021

Structurally complex and highly active RNA ligases derived from random RNA sequences

1 reference

https://api.crossref.org/works/10.1016%2FS0958-1669%2898%2980085-2

7 January 2021

Mapping Important Nucleotides in the Peptidyl Transferase Centre of 23 S rRNA using a Random Mutagenesis Approach

1 reference

https://api.crossref.org/works/10.1016%2FS0958-1669%2898%2980085-2

7 January 2021

Forced evolution of a regulatory RNA helix in the HIV-1 genome

1 reference

https://api.crossref.org/works/10.1016%2FS0958-1669%2898%2980085-2

7 January 2021

Ionic interactions and the global conformations of the hammerhead ribozyme

1 reference

https://api.crossref.org/works/10.1016%2FS0958-1669%2898%2980085-2

7 January 2021

Sometimes a great motion: the application of transient electric birefringence to the study of macromolecular structure

1 reference

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7 January 2021

The angle between the anticodon and aminoacyl acceptor stems of yeast tRNA(Phe) is strongly modulated by magnesium ions.

1 reference

https://api.crossref.org/works/10.1016%2FS0958-1669%2898%2980085-2

7 January 2021

A three-dimensional model for the hammerhead ribozyme based on fluorescence measurements

1 reference

https://api.crossref.org/works/10.1016%2FS0958-1669%2898%2980085-2

7 January 2021

Relative orientation of RNA helices in a group 1 ribozyme determined by helix extension electron microscopy

1 reference

https://api.crossref.org/works/10.1016%2FS0958-1669%2898%2980085-2

7 January 2021

The ribosome at higher resolution--the donut takes shape

1 reference

https://api.crossref.org/works/10.1016%2FS0958-1669%2898%2980085-2

7 January 2021

A model of protein synthesis based on cryo-electron microscopy of the E. coli ribosome

1 reference

https://api.crossref.org/works/10.1016%2FS0958-1669%2898%2980085-2

7 January 2021

The 70S Escherichia coli ribosome at 23 A resolution: fitting the ribosomal RNA.

1 reference

https://api.crossref.org/works/10.1016%2FS0958-1669%2898%2980085-2

7 January 2021

Direct Visualization of A-, P-, and E-Site Transfer RNAs in the Escherichia coli Ribosome

1 reference

https://api.crossref.org/works/10.1016%2FS0958-1669%2898%2980085-2

7 January 2021

Arrangement of tRNAs in pre- and posttranslocational ribosomes revealed by electron cryomicroscopy.

1 reference

https://api.crossref.org/works/10.1016%2FS0958-1669%2898%2980085-2

7 January 2021

Direct localization of the tRNAs within the elongating ribosome by means of neutron scattering (proton-spin contrast-variation).

1 reference

https://api.crossref.org/works/10.1016%2FS0958-1669%2898%2980085-2

7 January 2021

A new model for the three-dimensional folding of Escherichia coli 16 S ribosomal RNA. I. fitting the RNA to a 3D electron microscopic map at 20 Å 1 1Edited by D. E. Drapper

1 reference

https://api.crossref.org/works/10.1016%2FS0958-1669%2898%2980085-2

7 January 2021

A new technique for the characterization of long-range tertiary contacts in large RNA molecules: insertion of a photolabel at a selected position in 16S rRNA within the Escherichia coli ribosome

1 reference

https://api.crossref.org/works/10.1016%2FS0958-1669%2898%2980085-2

7 January 2021

Site-specific modification of pre-mRNA: the 2'-hydroxyl groups at the splice sites

1 reference

https://api.crossref.org/works/10.1016%2FS0958-1669%2898%2980085-2

7 January 2021

Site-specific crosslinking of mammalian U11 and u6atac to the 5' splice site of an AT-AC intron

1 reference

https://api.crossref.org/works/10.1016%2FS0958-1669%2898%2980085-2

7 January 2021

Site-directed hydroxyl radical probing of the rRNA neighborhood of ribosomal protein S5.

1 reference

https://api.crossref.org/works/10.1016%2FS0958-1669%2898%2980085-2

7 January 2021

Metal ion catalysis during splicing of premessenger RNA

1 reference

https://api.crossref.org/works/10.1016%2FS0958-1669%2898%2980085-2

7 January 2021

A second catalytic metal ion in a group I ribozyme

1 reference

https://api.crossref.org/works/10.1016%2FS0958-1669%2898%2980085-2

7 January 2021

Defining the chemical groups essential for Tetrahymena group I intron function by nucleotide analog interference mapping

1 reference

https://api.crossref.org/works/10.1016%2FS0958-1669%2898%2980085-2

7 January 2021

Modification interference approach to detect ribose moieties important for the optimal activity of a ribozyme

1 reference

https://api.crossref.org/works/10.1016%2FS0958-1669%2898%2980085-2

7 January 2021

Kinetic intermediates in RNA folding

1 reference

https://api.crossref.org/works/10.1016%2FS0958-1669%2898%2980085-2

7 January 2021