DNA sampling: a method for probing protein binding at specific loci on bacterial chromosomes (Q41810411)

12 October 2017

DNA sampling: a method for probing protein binding at specific loci on bacterial chromosomes (English)

1 reference

12 October 2017

Matej Butala

1

1 reference

PMCID

2655658

12 October 2017

Stephen J W Busby

series ordinal

2

1 reference

PMCID

2655658

12 October 2017

David J Lee

series ordinal

3

1 reference

12 October 2017

30 January 2009

1 reference

12 October 2017

Nucleic Acids Research

1 reference

12 October 2017

37

1 reference

12 October 2017

5

1 reference

12 October 2017

e37

1 reference

Purification of proteins associated with specific genomic Loci

12 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2655658

Analysis of mechanisms of activation and repression at bacterial promoters.

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2655658

The bacterial LexA transcriptional repressor.

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2655658

Methods for studying global patterns of DNA binding by bacterial transcription factors and RNA polymerase

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2655658

Rapid isolation and identification of bacteriophage T4-encoded modifications of Escherichia coli RNA polymerase: a generic method to study bacteriophage/host interactions

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2655658

Affinity isolation and I-DIRT mass spectrometric analysis of the Escherichia coli O157:H7 Sakai RNA polymerase complex.

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2655658

Multidimensional annotation of the Escherichia coli K-12 genome

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2655658

Proteomic identification of a novel Anaplasma phagocytophilum DNA binding protein that regulates a putative transcription factor

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2655658

Association of nucleoid proteins with coding and non-coding segments of the Escherichia coli genome.

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2655658

The identification of nucleic acid-interacting proteins using a simple proteomics-based approach that directly incorporates the electrophoretic mobility shift assay

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2655658

The comprehensive updated regulatory network of Escherichia coli K-12.

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2655658

The role of nucleoid-associated proteins in the organization and compaction of bacterial chromatin

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2655658

A cka-gfp transcriptional fusion reveals that the colicin K activity gene is induced in only 3 percent of the population

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2655658

Oligonucleotide trapping method for purification of transcription factors

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2655658

Advances in proteome analysis by mass spectrometry

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2655658

Transcription regulation of the colicin K cka gene reveals induction of colicin synthesis by differential responses to environmental signals.

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2655658

Rapid identification of DNA-binding proteins by mass spectrometry

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2655658

The complete genome sequence of Escherichia coli K-12

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2655658

Isolation of Plasmid-Protein Complexes from Escherichia coli

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2655658

The SOS response affects thermoregulation of colicin K synthesis

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2655658

The lambda Gam protein inhibits RecBCD binding to dsDNA ends.

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2655658

Gene replacement without selection: regulated suppression of amber mutations in Escherichia coli

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2655658

A proteomics approach for the identification of DNA binding activities observed in the electrophoretic mobility shift assay

18 August 2018

1 reference

12 December 2020

Generation of a Membrane Potential by One of Two Independent Pathways for Nitrite Reduction by Escherichia coli

1 reference

12 December 2020

Broad host range plasmids carrying the Escherichia coli lactose and galactose operons

1 reference

12 December 2020

Dimerisation mutants of Lac repressor. II. A single amino acid substitution, D278L, changes the specificity of dimerisation

1 reference

12 December 2020

Identifiers

DOI

10.1093/NAR/GKP043

1 reference

12 October 2017

1 reference

12 October 2017

1 reference

PMCID

2655658