Rare codon content affects the solubility of recombinant proteins in a codon bias-adjusted Escherichia coli strain. (Q41824344)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19630980%20AND%20SRC:MED&resulttype=core&format=json

3 February 2020

title

Rare codon content affects the solubility of recombinant proteins in a codon bias-adjusted Escherichia coli strain (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19630980%20AND%20SRC:MED&resulttype=core&format=json

3 February 2020

1 reference

1 reference

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19630980%20AND%20SRC:MED&resulttype=core&format=json

3 February 2020

Eduardo A. Ceccarelli

series ordinal

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19630980%20AND%20SRC:MED&resulttype=core&format=json

3 February 2020

author name string

Germán L Rosano

series ordinal

1

1 reference

12 October 2017

Eduardo A Ceccarelli

series ordinal

2

1 reference

12 October 2017

24 July 2009

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19630980%20AND%20SRC:MED&resulttype=core&format=json

3 February 2020

published in

Microbial Cell Factories

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19630980%20AND%20SRC:MED&resulttype=core&format=json

3 February 2020

volume

8

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19630980%20AND%20SRC:MED&resulttype=core&format=json

3 February 2020

page(s)

41

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19630980%20AND%20SRC:MED&resulttype=core&format=json

Synonymous mutations and ribosome stalling can lead to altered folding pathways and distinct minima

3 February 2020

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2723077

Folding at the rhythm of the rare codon beat

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2723077

Modulation of the enzymatic efficiency of ferredoxin-NADP(H) reductase by the amino acid volume around the catalytic site.

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2723077

Chaperones in control of protein disaggregation

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2723077

Production of active eukaryotic proteins through bacterial expression systems: a review of the existing biotechnology strategies

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2723077

Rare codon clusters at 5'-end influence heterologous expression of archaeal gene in Escherichia coli.

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2723077

Overview of bacterial expression systems for heterologous protein production: from molecular and biochemical fundamentals to commercial systems

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2723077

Understanding the relationship between the primary structure of proteins and its propensity to be soluble on overexpression in Escherichia coli

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2723077

Advanced genetic strategies for recombinant protein expression in Escherichia coli

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2723077

Codon bias and heterologous protein expression

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2723077

Inclusion bodies: formation and utilisation.

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2723077

Open questions in ferredoxin‐NADP+ reductase catalytic mechanism

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2723077

Function of the sigma(E) regulon in dead-cell lysis in stationary-phase Escherichia coli

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2723077

Fine architecture of bacterial inclusion bodies

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2723077

High-efficiency cloning of Arabidopsis full-length cDNA by biotinylated CAP trapper

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2723077

Overexpression of an mRNA dependent on rare codons inhibits protein synthesis and cell growth

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2723077

Gratuitous overexpression of genes in Escherichia coli leads to growth inhibition and ribosome destruction

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2723077

Effects of rare codon clusters on high-level expression of heterologous proteins in Escherichia coli

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2723077

The efficiency of folding of some proteins is increased by controlled rates of translation in vivo. A hypothesis

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2723077

Phosphonate biosynthesis: molecular cloning of the gene for phosphoenolpyruvate mutase from Tetrahymena pyriformis and overexpression of the gene product in Escherichia coli

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2723077

A rapid, sensitive, and versatile assay for protein using Coomassie brilliant blue G250.

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2723077

Transient ribosomal attenuation coordinates protein synthesis and co-translational folding.

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2723077

Bacterial inclusion bodies are cytotoxic in vivo in absence of functional chaperones DnaK or GroEL.

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2723077

Inhibition of pea ferredoxin-NADP(H) reductase by Zn-ferrocyanide

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2723077

Mistranslational errors associated with the rare arginine codon CGG in Escherichia coli

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2723077

Modulation of lambda integrase synthesis by rare arginine tRNA.

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2723077

Use of modified BL21(DE3) Escherichia coli cells for high-level expression of recombinant peanut allergens affected by poor codon usage

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2723077

Proteolytic digestion of bacterial inclusion body proteins during dynamic transition between soluble and insoluble forms

3 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19630980

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/1475-2859-8-41

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19630980%20AND%20SRC:MED&resulttype=core&format=json

Dimensions Publication ID

3 February 2020

1 reference

9 September 2019

https://scigraph.springernature.com/pub.10.1186/1475-2859-8-41

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19630980%20AND%20SRC:MED&resulttype=core&format=json

3 February 2020

PubMed publication ID

19630980

1 reference