Simulation studies of alamethicin-bilayer interactions (Q41824488)

12 October 2017

Simulation studies of alamethicin-bilayer interactions (English)

1 reference

12 October 2017

P C Biggin

1

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12 October 2017

J Breed

series ordinal

2

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12 October 2017

H S Son

series ordinal

3

1 reference

12 October 2017

M S Sansom

series ordinal

4

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12 October 2017

language of work or name

English

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publication date

1 February 1997

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12 October 2017

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12 October 2017

72

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12 October 2017

2 Pt 1

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12 October 2017

627-636

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Lipid-alamethicin interactions influence alamethicin orientation

12 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1185590

Canonical dynamics: Equilibrium phase-space distributions

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1185590

The pore domain of the nicotinic acetylcholine receptor: molecular modeling, pore dimensions, and electrostatics.

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1185590

Free-energy determinants of alpha-helix insertion into lipid bilayers

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1185590

Hydrogen bond stabilities in membrane-reconstituted alamethicin from amide-resolved hydrogen-exchange measurements

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1185590

Membrane orientation of the N-terminal segment of alamethicin determined by solid-state 15N NMR

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1185590

Two classes of alamethicin transmembrane channels: molecular models from single-channel properties

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1185590

Membrane structure of voltage-gated channel forming peptides by site-directed spin-labeling

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1185590

A Monte Carlo model of fd and Pf1 coat proteins in lipid membranes

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1185590

Insertion of peptide chains into lipid membranes: an off-lattice Monte Carlo dynamics model

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1185590

Probability of alamethicin conductance states varies with nonlamellar tendency of bilayer phospholipids.

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1185590

Calculations of the electrostatic potential adjacent to model phospholipid bilayers

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1185590

Ion-channel gating. Twist to open.

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1185590

Structure and fluctuations of bacteriorhodopsin in the purple membrane: a molecular dynamics study

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1185590

Molecular flexibility demonstrated by paramagnetic enhancements of nuclear relaxation. Application to alamethicin: a voltage-gated peptide channel

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1185590

Parallel helix bundles and ion channels: molecular modeling via simulated annealing and restrained molecular dynamics

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1185590

Alamethicin: A Peptide Model for Voltage Gating and Protein-Membrane Interactions

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1185590

Structure and function of channel-forming peptaibols

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1185590

Hydrogen bonding in globular proteins

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1185590

Alamethicin. A rich model for channel behavior

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1185590

A voltage-gated ion channel model inferred from the crystal structure of alamethicin at 1.5-Å resolution

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1185590

Electrostatic interactions in membranes and proteins

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1185590

Automated modeling of coiled coils: application to the GCN4 dimerization region

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1185590

Electric field dependence of alamethicin channels

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1185590

Modeling of the structure of bacteriorhodopsin. A molecular dynamics study

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1185590

Model ion channels: gramicidin and alamethicin

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1185590

Picosecond dynamics of tyrosine side chains in proteins

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1185590

Effects of electric field on alamethicin bound at the lipid-water interface: a molecular mechanics study

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1185590

Successful prediction of the coiled coil geometry of the GCN4 leucine zipper domain by simulated annealing: Comparison to the X-ray structure

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1185590

Packing interactions of aib-containing helices: Molecular modeling of parallel dimers of simple hydrophobic helices and of alamethicin

2 December 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1185590

Restrained and unrestrained molecular dynamics simulations in the NVT ensemble of alamethicin

2 December 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1185590

Simulation of voltage-dependent interactions of alpha-helical peptides with lipid bilayers

2 December 2018

1 reference

12 December 2020

Engineering stabilized ion channels: covalent dimers of alamethicin

1 reference

12 December 2020

Comparison of the conformation and orientation of alamethicin and melittin in lipid membranes

1 reference

12 December 2020

Acetylcholine receptor channel imaged in the open state

1 reference

12 December 2020

Antimicrobial peptide pores in membranes detected by neutron in-plane scattering

1 reference

12 December 2020

The effect of pulsed electric fields on the phosphorus-31 spectra of lipid bilayers

1 reference

12 December 2020

Structural features of isolated M2 helices of nicotinic receptors. Simulated annealing via molecular dynamics studies

1 reference

12 December 2020

A molecular model of membrane excitability

1 reference

12 December 2020

Structure, energetics, and dynamics of lipid-protein interactions: A molecular dynamics study of the gramicidin A channel in a DMPC bilayer

1 reference

12 December 2020

The dynamic properties of melittin in solution. Investigations by NMR and molecular dynamics

1 reference

12 December 2020

High-resolution 1H NMR study of the solution structure of alamethicin

1 reference

12 December 2020

Kinked structures of isolated nicotinic receptor M2 helices: a molecular dynamics study

1 reference

12 December 2020

Molecular modelling of Staphylococcal delta-toxin ion channels by restrained molecular dynamics

1 reference

12 December 2020

Nicotinic acetylcholine receptor at 9 A resolution.

1 reference

12 December 2020

Molecular dynamics simulations of isolated transmembrane helices of potassium channels

1 reference

12 December 2020

Modelling packing interactions in parallel helix bundles: pentameric bundles of nicotinic receptor M2 helices

1 reference

12 December 2020

Structure and orientation of the mammalian antibacterial peptide cecropin P1 within phospholipid membranes

1 reference

12 December 2020

Effects of polycations on ion channels formed by neutral and negatively charged alamethicins

1 reference

12 December 2020

The structure of a membrane-spanning polypeptide studied by molecular dynamics

1 reference

12 December 2020

10.1016/S0006-3495(97)78701-0

Identifiers

DOI

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12 October 2017

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12 October 2017

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