Discrimination of methylcytosine from hydroxymethylcytosine in DNA molecules (Q41977203)

14 October 2017

Discrimination of methylcytosine from hydroxymethylcytosine in DNA molecules (English)

1 reference

14 October 2017

Meni Wanunu

1

1 reference

14 October 2017

Devora Cohen-Karni

2

1 reference

14 October 2017

Robert R Johnson

3

1 reference

14 October 2017

Lauren Fields

4

1 reference

14 October 2017

Jack Benner

5

1 reference

14 October 2017

Neil Peterman

6

1 reference

14 October 2017

Yu Zheng

7

1 reference

14 October 2017

Michael L Klein

8

1 reference

14 October 2017

Marija Drndic

9

1 reference

14 October 2017

language of work or name

English

0 references

publication date

14 December 2010

1 reference

Journal of the American Chemical Society

14 October 2017

1 reference

14 October 2017

133

1 reference

14 October 2017

3

1 reference

14 October 2017

486-492

1 reference

All-atom empirical potential for molecular modeling and dynamics studies of proteins

14 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3081508

Deciphering ionic current signatures of DNA transport through a nanopore

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3081508

Role of Tet proteins in 5mC to 5hmC conversion, ES-cell self-renewal and inner cell mass specification

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3081508

Direct detection of DNA methylation during single-molecule, real-time sequencing

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3081508

The behaviour of 5-hydroxymethylcytosine in bisulfite sequencing

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3081508

Human DNA methylomes at base resolution show widespread epigenomic differences

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3081508

The nuclear DNA base 5-hydroxymethylcytosine is present in Purkinje neurons and the brain

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3081508

Conversion of 5-methylcytosine to 5-hydroxymethylcytosine in mammalian DNA by MLL partner TET1

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3081508

Continuous base identification for single-molecule nanopore DNA sequencing

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3081508

Nanoelectromechanics of methylated DNA in a synthetic nanopore.

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3081508

The potential and challenges of nanopore sequencing

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3081508

Electromechanical unzipping of individual DNA molecules using synthetic sub-2 nm pores.

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3081508

DNA translocation governed by interactions with solid-state nanopores.

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3081508

3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3081508

Stretching and unzipping nucleic acid hairpins using a synthetic nanopore

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3081508

DNA conformation and base number simultaneously determined in a nanopore

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3081508

The electromechanics of DNA in a synthetic nanopore

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3081508

Orientation discrimination of single-stranded DNA inside the alpha-hemolysin membrane channel

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3081508

DNA molecules and configurations in a solid-state nanopore microscope

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3081508

UV light-damaged DNA and its interaction with human replication protein A: an atomic force microscopy study

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3081508

Impact of CpG methylation on structure, dynamics and solvation of cAMP DNA responsive element

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3081508

Microsecond time-scale discrimination among polycytidylic acid, polyadenylic acid, and polyuridylic acid as homopolymers or as segments within single RNA molecules

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3081508

Scanning force microscopy of DNA deposited onto mica: equilibration versus kinetic trapping studied by statistical polymer chain analysis.

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3081508

Hypermodified bases in DNA.

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3081508

Modified bases in bacteriophage DNAs

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3081508

The presence of 5-hydroxymethylcytosine in animal deoxyribonucleic acid

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3081508

Quantification of the sixth DNA base hydroxymethylcytosine in the brain

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3081508

Enzymatic approaches and bisulfite sequencing cannot distinguish between 5-methylcytosine and 5-hydroxymethylcytosine in DNA.

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3081508

Discrimination of single base substitutions in a DNA strand immobilized in a biological nanopore

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3081508

High flexibility of DNA on short length scales probed by atomic force microscopy.

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3081508

Detection of Local Protein Structures along DNA Using Solid-State Nanopores

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3081508

Examination of the specificity of DNA methylation profiling techniques towards 5-methylcytosine and 5-hydroxymethylcytosine

2 December 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21155562

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Restriction of nonglucosylated T-even bacteriophage: properties of permissive mutants of Escherichia coli B and K12

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21155562

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1021/JA107836T

1 reference

release_k6kywb2qnbbj3akr5s3uqumwgu

14 October 2017

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/k6kywb2qnbbj3akr5s3uqumwgu

mapped directly with Wikidata item

24 November 2022

based on heuristic

1 reference

14 October 2017

1 reference