Comparative photocross-linking analysis of the tertiary structures of Escherichia coli and Bacillus subtilis RNase P RNAs. (Q41977237)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9482748%20AND%20SRC:MED&resulttype=core&format=json

9 November 2019

title

Comparative photocross-linking analysis of the tertiary structures of Escherichia coli and Bacillus subtilis RNase P RNAs (English)

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9 November 2019

1 reference

1 reference

1

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9 November 2019

author name string

J M Nolan

series ordinal

2

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9 November 2019

M E Harris

series ordinal

3

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9 November 2019

N R Pace

series ordinal

4

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9 November 2019

language of work or name

English

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publication date

1 March 1998

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9 November 2019

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9 November 2019

volume

17

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9 November 2019

issue

5

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9 November 2019

page(s)

1515-1525

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9 November 2019

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170499

Ribonuclease P RNA: models of the 15/16 bulge from Escherichia coli and the P15 stem loop of Bacillus subtilis

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170499

Analysis of the tertiary structure of the ribonuclease P ribozyme-substrate complex by site-specific photoaffinity crosslinking

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170499

Structure and evolution of ribonuclease P RNA in Gram-positive bacteria

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170499

The catalytic core of RNase P.

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170499

Probing of tertiary interactions in RNA: 2'-hydroxyl-base contacts between the RNase P RNA and pre-tRNA.

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170499

Comparative analysis of ribonuclease P RNA structure in Archaea

5 June 2018

1 reference

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Comparative analysis of ribonuclease P RNA using gene sequences from natural microbial populations reveals tertiary structural elements

5 June 2018

1 reference

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The P9.1-P9.2 peripheral extension helps guide folding of the Tetrahymena ribozyme

5 June 2018

1 reference

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GAAA tetraloop and conserved bulge stabilize tertiary structure of a group I intron domain

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170499

Recent studies of ribonuclease P.

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170499

Identification of phosphates involved in catalysis by the ribozyme RNase P RNA

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170499

Evolutionary perspective on the structure and function of ribonuclease P, a ribozyme

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170499

Base pairing between Escherichia coli RNase P RNA and its substrate

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170499

Interaction of the 3′-end of tRNA with ribonuclease P RNA

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170499

Use of photoaffinity crosslinking and molecular modeling to analyze the global architecture of ribonuclease P RNA

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170499

Phylogenetic comparative chemical footprint analysis of the interaction between ribonuclease P RNA and tRNA

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170499

Modeling large RNAs and ribonucleoprotein particles using molecular mechanics techniques

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170499

A quantitative model of the Escherichia coli 16 S RNA in the 30 S ribosomal subunit.

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170499

Further perspective on the catalytic core and secondary structure of ribonuclease P RNA

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170499

An important RNA tertiary interaction of group I and group II introns is implicated in gram-positive RNase P RNAs.

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170499

The RNA moiety of ribonuclease P is the catalytic subunit of the enzyme

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170499

Synthesis of small RNAs using T7 RNA polymerase

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170499

The RNA component of the Bacillus subtilis RNase P. Sequence, activity, and partial secondary structure

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170499

Prediction of the three-dimensional structure of Escherichia coli 30S ribosomal subunit: a molecular mechanics approach

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170499

Mapping the active site of ribonuclease P RNA using a substrate containing a photoaffinity agent.

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170499

DNA sequencing with chain-terminating inhibitors

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170499

Identification of the universally conserved core of ribonuclease P RNA.

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170499

Phylogenetic evidence for a new tertiary interaction in bacterial RNase P RNAs

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170499

Mycoplasma fermentans simplifies our view of the catalytic core of ribonuclease P RNA.

18 August 2018

1 reference

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Circularly permuted tRNAs as specific photoaffinity probes of ribonuclease P RNA structure.

18 August 2018

1 reference

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Identification of base-triples in RNA using comparative sequence analysis.

18 August 2018

1 reference

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Recognition of the T stem-loop of a pre-tRNA substrate by the ribozyme from Bacillus subtilis ribonuclease P

18 August 2018

1 reference

12 December 2020

Gap-scan deletion analysis of Bacillus subtilis RNase P RNA

1 reference

12 December 2020

Contributions of phylogenetically variable structural elements to the function of the ribozyme ribonuclease P

1 reference

12 December 2020

New loop-loop tertiary interactions in self-splicing introns of subgroup IC and ID: a complete 3D model of the Tetrahymena thermophila ribozyme

1 reference

12 December 2020

Selection of circularly permuted ribozymes from Bacillus subtilis RNAse P by substrate binding

1 reference

12 December 2020

Ion dependence of the Bacillus subtilis RNase P reaction

1 reference

12 December 2020

Identifiers

DOI

10.1093/EMBOJ/17.5.1515

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9482748%20AND%20SRC:MED&resulttype=core&format=json

9 November 2019

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9482748%20AND%20SRC:MED&resulttype=core&format=json

9 November 2019

1 reference