CTnDOT integrase interactions with attachment site DNA and control of directionality of the recombination reaction (Q41982411)

14 October 2017

CTnDOT integrase interactions with attachment site DNA and control of directionality of the recombination reaction (English)

1 reference

14 October 2017

Margaret M Wood

1

1 reference

14 October 2017

Jeanne M Dichiara

series ordinal

2

1 reference

14 October 2017

Sumiko Yoneji

series ordinal

3

1 reference

14 October 2017

Jeffrey F Gardner

series ordinal

4

1 reference

14 October 2017

28 May 2010

1 reference

14 October 2017

Journal of Bacteriology

1 reference

14 October 2017

192

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14 October 2017

15

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14 October 2017

3934-3943

1 reference

Homology-dependent interactions determine the order of strand exchange by IntDOT recombinase

14 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2916390

A biotin interference assay highlights two different asymmetric interaction profiles for lambda integrase arm-type binding sites in integrative versus excisive recombination

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2916390

IntDOT interactions with core- and arm-type sites of the conjugative transposon CTnDOT.

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2916390

Spermidine biases the resolution of Holliday junctions by phage lambda integrase

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2916390

DNA arms do the legwork to ensure the directionality of lambda site-specific recombination

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2916390

Lambda integrase: armed for recombination

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2916390

A structural basis for allosteric control of DNA recombination by lambda integrase.

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2916390

Factors required in vitro for excision of the Bacteroides conjugative transposon, CTnDOT.

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2916390

Arm sequences contribute to the architecture and catalytic function of a lambda integrase-Holliday junction complex.

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2916390

Interactions between integrase and excisionase in the phage lambda excisive nucleoprotein complex

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2916390

Development of an in vitro integration assay for the Bacteroides conjugative transposon CTnDOT.

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2916390

Protein and DNA requirements of the bacteriophage HP1 recombination system: a model for intasome formation

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2916390

Identification of genes required for excision of CTnDOT, a Bacteroides conjugative transposon

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2916390

The small DNA binding domain of lambda integrase is a context-sensitive modulator of recombinase functions

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2916390

Evidence for extensive resistance gene transfer among Bacteroides spp. and among Bacteroides and other genera in the human colon

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2916390

The isomeric preference of Holliday junctions influences resolution bias by lambda integrase

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2916390

Characterization of the mycobacteriophage L5 attachment site, attP.

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2916390

Mutational analysis of protein binding sites involved in formation of the bacteriophage lambda attL complex

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2916390

Conjugative transposons: an unusual and diverse set of integrated gene transfer elements.

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2916390

Conjugative transposition: Tn916 integrase contains two independent DNA binding domains that recognize different DNA sequences

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2916390

Determinants of directionality in lambda site-specific recombination

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2916390

Patterns of lambda Int recognition in the regions of strand exchange

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2916390

Bacteriophage lambda int protein recognizes two classes of sequence in the phage att site: characterization of arm-type sites

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2916390

Autonomous DNA binding domains of lambda integrase recognize two different sequence families

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2916390

DNA looping generated by DNA bending protein IHF and the two domains of lambda integrase

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2916390

Genetic analysis of bacteriophage lambda integrase interactions with arm-type attachment site sequences

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2916390

Mapping of a higher order protein-DNA complex: two kinds of long-range interactions in lambda attL.

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2916390

A comparison of the effects of single-base and triple-base changes in the integrase arm-type binding sites on the site-specific recombination of bacteriophage lambda

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2916390

A switch in the formation of alternative DNA loops modulates lambda site-specific recombination

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2916390

Lambda Int protein bridges between higher order complexes at two distant chromosomal loci attL and attR.

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2916390

Characterization of the bacteriophage lambda excisionase (Xis) protein: the C-terminus is required for Xis-integrase cooperativity but not for DNA binding

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2916390

Interaction of int protein with specific sites on λ att DNA

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2916390

Characterization of a conjugative transposon integrase, IntDOT.

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2916390

Structure of the P22 att site. Conservation and divergence in the lambda motif of recombinogenic complexes.

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2916390

The molecular basis of co‐operative DNA binding between lambda integrase and excisionase

18 August 2018

1 reference

12 December 2020

Role of the Xis protein of bacteriophage λ in a specific reactive complex at the attR prophage attachment site

1 reference

12 December 2020

Purification and properties of the bacteriophage lambda Int protein

1 reference

12 December 2020

Mutational analysis of integrase arm-type binding sites of bacteriophage lambda. Integration and excision involve distinct interactions of integrase with arm-type sites

1 reference

12 December 2020

Protein-protein interactions in a higher-order structure direct lambda site-specific recombination

1 reference

12 December 2020

In vitro analysis of sequence requirements for the excision reaction of the Bacteroides conjugative transposon, CTnDOT

1 reference

12 December 2020

Identifiers

DOI

10.1128/JB.00351-10

1 reference

14 October 2017

1 reference

14 October 2017

PubMed publication ID

20511494

1 reference